Ictalurus punctatus (channel catfish): 108271132
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Entry
108271132 CDS
T04658
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X2
KO
K15516
fragile X mental retardation protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108271132
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108271132
Factors involved in mRNA localization
Other mRNA localization factors
108271132
mRNA cycle factors
Stress granule specific factors
108271132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
FXR_C3
Agenet
FXR_C1
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
108271132
NCBI-ProteinID:
XP_017333931
Ensembl:
ENSIPUG00000024597
UniProt:
A0A2D0RUS5
LinkDB
All DBs
Position
10:17711973..17727702
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AA seq
665 aa
AA seq
DB search
MDELTVEVRGSNGAYYKGFVKDVHEDSLSISFENNWQPERQVPFCDVRLPPPADVKKEIG
EGDEVEIYSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNLNKA
VTRNTFYKCTVPVPDDLKAACENELAHKDFKKAVGASRIFYNPETCELLVLSVNEVTVKR
VSLLSDMHLRSIRTKLMLMYRNEEATKHLESSKQLASAFQEEFIVREDLMGLAIGSHGTN
IQQARKIPGVTAIELDEESGTFRVYGETAEAVQKARSYLEFLEESVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNNLPRQEGMVPFTFVGTKESIGNVQVLLEYHIAYLNE
VEQLRLERLQIDEQLRQIGLGYRPVPARSTEKDKERSYGVDESVSAVSLHSGRSYTGRGR
ARRTANHNSAYGMNLEHPYTSETDSERRDELSDFSLREDEDERGVQPRDSRRRAAGVRGR
GGSGVRGHGSGRGSGSTMSSVLKDPDRNPYSILDTSESDQIADAEGSECEPSSRSRRSRR
RRPESDDNTSLSENGLDEPEFKPPRQIRSRRRRIRPPEERQPVTVADYISRAESHSRQRM
PRDLKKNKKDLGQVDVISEHAVSKQLTNGPDANTDEQKKAPCASTETTPNGESDVVNPTV
VNGLS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactgacggttgaggttcgtggctccaatggagcttattataagggcttcgtc
aaagacgttcatgaggactcgctctctatttcgttcgaaaacaattggcagccggagaga
caggtcccgttctgtgacgtgcgcttgcctcctcctgctgacgtgaagaaggagatcggc
gagggagacgaagtggagatctactcgagggcgaacgagcaggaaccgtgtggctggtgg
ctcgcgaaagtgcgcatgatgaagggagacttctatgtgattgagtacgcagcttgtgac
gccacatacaatgagatcgtcacatttgagcgcctgcggcctgtgaacctcaacaaagct
gtgacaagaaacaccttttacaagtgcactgttcctgttcctgatgatctgaaggctgcc
tgtgagaacgagcttgctcataaggactttaagaaggctgtaggagcgagcaggatcttc
tacaaccctgaaacctgtgagctgcttgtcctttctgtaaacgaggtgacggtgaagaga
gtgtctctcctgagtgacatgcacttgaggagcattcgcactaaactcatgctcatgtac
aggaacgaggaggccacaaaacacttagagagctcgaagcagctagcatcagcgttccag
gaggagttcatcgtgcgagaggatctgatgggtcttgccatcggtagccatggcacaaac
atccaacaggccaggaaaattccgggcgtgactgccatcgagctggacgaagagagtggc
acattcagggtttatggagagactgcagaggctgtccagaaagcaaggagctacctggag
ttcctggaagagtcagttcaaattcccagaaatctagtcggcaaggtgattggtaaaaac
ggcaaggtcattcaggagatcgtggataaatccggggtggtgcgagtacggatcgaagga
gacaatgacaacaatcttcccagacaagagggaatggtgcccttcacatttgttggcaca
aaggagagcatcggaaacgttcaagtccttctggagtaccacattgcttatctgaatgag
gtggagcagttgaggttggagcggctgcagatcgacgagcagctgcgtcagatcggtttg
ggttatcggcctgttccggcacgttccacggaaaaagacaaagagaggagctatggggtg
gacgaaagtgtatccgctgtctcgctccactccgggcgctcctacacgggccggggacgt
gcacgcaggaccgccaaccacaactcagcctatggaatgaacttggagcacccgtacacc
tcagagacagattctgagcggagagatgaactgagtgatttctctctaagagaagatgag
gatgagcgtggtgtccagcccagggacagcaggaggagagcggcaggagtccgaggtcgc
ggtgggtcgggagtcagaggtcacggctctggaagagggtcagggagcaccatgagctca
gttctgaaggatccagaccggaacccgtacagcattttggatacatccgagtcggatcag
attgccgatgcagaagggagtgagtgtgaaccgagttctcggagccgacgctcgcgccgc
cgacgccctgaatccgacgacaacacatcactcagtgagaatggcctcgatgagcctgaa
tttaaacctccgcggcaaatccgcagccgccgccgtcgcattcgtcctccagaggagaga
cagccagtcaccgtggccgattacatatcacgtgctgaatcacacagcaggcagagaatg
ccacgagatctgaagaagaataaaaaagacttgggtcaggtggacgtcatatctgagcac
gccgtctccaaacagctcaccaacggccccgatgctaacactgacgagcagaaaaaggca
ccatgcgcttccacagaaacaacccccaacggggaaagcgatgtggtcaacccaaccgtc
gttaacggactctcctaa
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