Ictalurus punctatus (channel catfish): 108271181
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Entry
108271181 CDS
T04658
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108271181
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
108271181
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108271181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
108271181
NCBI-ProteinID:
XP_017334038
Ensembl:
ENSIPUG00000024787
UniProt:
A0A2D0RU60
LinkDB
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Position
10:complement(17057438..17063630)
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AA seq
454 aa
AA seq
DB search
MAAVESDGVSAPLPGRCAFYVAKKKRYCKMVVGNGKKFCGEHADSDSERKRIPCPLDPKH
TVFEDSLAKHLKKCNSKEKPKPVYYVKDINAGSVTEEENTIDEVSIAERSKEELNSLIQK
LKTALNGLNTEPDTSLLSHPALNDALNDPKNGNFAYKHLKQQASILGNMEDLELLGPERC
YVEFGAGKGKLSHWIHVALQEAENVHFLLVERSSTRFKVDGKHKNTDSTFDRLQVDIQHL
DLSRVPFLQEKQLPVIAVGKHLCGAATDLALRCLFERSAKDKDCEPPTKRIKLQEKGGEE
QTRSIESSEEVVVLGLTVALCCHHRCEWRHYVGKDFFRERGLGETEFSAFQRMSSWATCG
MSRVKSSLNPEKSTQENVEDGEEGEHEESSENMPDHLNNDISAEEREHVGRLCKMLINHG
RLHYLQQRGFKPSLRYYTSRDVSLENVLLTALPS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcgagtcagacggagtttcagctcctttacctggacggtgcgccttttac
gtggcgaaaaagaaacgttactgcaaaatggtggttggtaacggaaaaaagttttgcggt
gaacatgcagattcagatagtgagagaaaacggatcccctgccctctggacccaaagcac
actgtgtttgaagacagtttggccaaacacctgaaaaagtgtaattcgaaggaaaagccc
aaacctgtctactatgtgaaagacatcaatgctgggtctgtaactgaagaggaaaacacc
atagatgaggtgtccattgctgagcgatctaaagaggaactgaatagtcttattcagaaa
ttgaagaccgcgctgaacggattaaacacagaacctgacactagccttctctcacatccg
gctttaaacgatgctcttaatgatcccaagaatgggaactttgcttataaacacctcaag
cagcaggcctcgatcctggggaatatggaggatctggagctgcttgggccagagaggtgt
tatgtggagtttggtgctggaaaaggtaaactctcccactggattcacgttgcccttcag
gaagcagagaacgtccacttcctgttagtagagaggtccagtactcgttttaaggtagat
ggcaaacataaaaacacagactcgacattcgacaggctgcaggttgacatccagcacctc
gacttaagcagagtgccatttttacaagaaaagcaacttcctgtaatcgcagtgggcaaa
cacctgtgtggtgcagcaacagatttggctctgcgatgtttatttgagcgcagtgcaaaa
gacaaagactgtgagcctcccactaaacgtataaaactgcaagaaaaaggtggtgaggaa
cagactcgtagtattgaaagcagcgaggaggttgtggtgttggggctcacagttgcactc
tgctgccatcatcgctgtgagtggaggcattatgtaggaaaggactttttccgagagcga
ggtcttggagaaacagagttttcagctttccagcgcatgtccagttgggctacatgtggc
atgagcagagtcaaatcatccttaaatcctgagaaatccacacaagagaatgtcgaagac
ggagaagagggtgaacatgaagagagttctgaaaacatgcctgatcatctcaacaatgat
atttcagcagaggagcgtgagcacgtcggacgcctgtgcaagatgctgatcaaccacggc
agattgcattacctccagcagcgaggcttcaaacccagcctcagatactacaccagccga
gacgtgtctttagagaacgtgctactgactgcgcttcccagctga
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