Ictalurus punctatus (channel catfish): 108271186
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Entry
108271186 CDS
T04658
Name
(RefSeq) probable ATP-dependent RNA helicase DDX59
KO
K19466
ATP-dependent RNA helicase DDX59 [EC:
5.6.2.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108271186
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108271186
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-HIT
ResIII
Toprim_C_rpt
CMS1
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
108271186
NCBI-ProteinID:
XP_017334045
Ensembl:
ENSIPUG00000008100
UniProt:
W5UDL7
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All DBs
Position
10:8429684..8438004
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AA seq
629 aa
AA seq
DB search
MFMPRSLKVKRAPDSQKTTEAKKSKGNLDDTVTISDATEVHSVDKCLPVKTEDKPDESHE
DATILQSELLRNETEVSEEAQEDEEPVKAFKKSQRWPDPGEPVCVMCGRYGEYICDNTDN
DVCSLECKASHLASMCMGLRERVFSKMKQEGTGISPSATHTDHSSDSAELGYSYKEDAFI
TDLTEDQVERVKKELAIVTEGRDVRRPIIEFEHCRFPEVLRMNLKKAGYEAPTPIQMQMV
PIGLVGRDVIATADTGSGKTIAFLLPVVVHCLEKEAGTSPGPVNVILTPTRELAIQIERQ
VKELIMGLPNMRTALLVGGMPLPPQLHRLKQKIKIVIATPGRLIEILKQKAVQLDGVKVV
VVDEADTMLKMGFQQQVFEILEHIPNDHQTLLTSATIPAGTELLISRLTSDPVRITVGQK
NQPCANVRQIVLWVEEPSKKKKLFEILNDRKLYQPPVVVFVDCKLGADLLCEAVHKVMGL
NTVAIHSDKTQWERNRILKGLLDGQFEVVVSTGVLGRGLDLVNVKLVVNFDMPTNMDEYV
HQIGRAGRLGHRGTAITFMNNNNKRLFLGIVERVKPTGSQLPPQLLNSPHLIEQQRRARK
SNKQGRDDVVTKSNIIDIIKKHDRSHFKK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgcctcgatcgttaaaggttaagagagcgcccgacagtcagaaaactaccgag
gcgaaaaaaagcaaaggtaacttagatgacactgtgactatttcagatgctaccgaggtg
cacagtgtggataaatgtttgccagtgaaaacagaagataaacctgacgaatcgcacgaa
gacgccacgatattacaaagcgagttgctcagaaatgaaacagaggtgtctgaagaggcg
caggaggacgaggaacctgtaaaagcgttcaagaaaagccagagatggccagacccaggg
gagcctgtttgtgtcatgtgcggccgttatggcgagtacatttgcgacaatactgacaat
gatgtgtgcagtctggagtgcaaggcgagccacttggccagcatgtgcatgggacttcga
gaaagggtcttctccaaaatgaagcaagagggtacaggtatctctccatcggccacacat
actgaccactcttctgatagtgctgaacttggctactcctacaaagaggatgccttcata
acagatctgactgaagaccaggttgaaagggtgaagaaagaactggcaattgttacagaa
ggtcgggatgtccgtaggcccattattgagtttgagcactgccgctttcctgaagtgctc
aggatgaacctgaagaaggctggctatgaggcgccgactcctatccaaatgcagatggtt
cctataggtttggttgggagagatgtaattgccacagctgacacaggatctggaaagacc
attgccttcctgcttccagtggtggttcattgcttggagaaggaagcaggtacttcaccc
ggacctgtgaatgtgattctgactccaacccgagagctggctatccaaatcgagagacag
gtaaaggagctgattatgggcttgcccaacatgaggactgcgctgctggtcggagggatg
cctctaccgcctcagctacatcggctcaaacagaaaatcaagattgtgattgccactcca
ggccgtctcatagagattctgaagcagaaggctgtccagcttgacggcgtaaaagtcgta
gtggttgatgaggctgataccatgctgaagatgggattccagcaacaagtgtttgagatt
ttggagcacattcctaatgaccaccagactttgctgacctctgccacgatacctgcagga
acggagctgctaatctctcgtctgaccagcgatcccgtacgcattacagtcggccagaag
aatcaaccatgtgctaacgttcgccagatcgttctctgggtggaggagccgtcgaagaaa
aagaagctcttcgagattctaaacgacagaaagctctaccagccacctgtggtggtgttt
gtggactgtaaactcggagctgaccttttatgtgaggctgtacacaaagttatgggttta
aatacagtagctattcactctgacaagacacagtgggagcgcaaccggatcctcaagggt
ctgcttgacggtcagtttgaagtggtggttagtacaggcgtactgggtagaggactggac
ctggtcaatgtcaagctggtggtgaattttgacatgccaactaacatggatgagtatgtt
catcagattggtagagcaggaagactcgggcacagagggacagcaatcaccttcatgaat
aacaacaataagcgcttatttctgggcatcgtggagagagtaaagccgactggctcccag
cttccaccgcaactcctcaactccccacatctaatcgaacagcaaaggagagccagaaaa
agtaataaacaaggaagggatgatgtcgtgaccaagagcaatattattgacattattaaa
aagcatgacaggagccattttaagaagtga
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