Ictalurus punctatus (channel catfish): 108271237
Help
Entry
108271237 CDS
T04658
Name
(RefSeq) protein Lines homolog 1
KO
K22533
protein Lines
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108271237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LINES_N
LINES_C
FTO_CTD
Motif
Other DBs
NCBI-GeneID:
108271237
NCBI-ProteinID:
XP_017334154
Ensembl:
ENSIPUG00000023142
UniProt:
W5U7V2
LinkDB
All DBs
Position
10:complement(21009038..21015487)
Genome browser
AA seq
662 aa
AA seq
DB search
MNMDSQHSDLQAVFTDLRSGVVPAMSTEELASQISSAINCSLHILLQSPHSMTSEDTEMT
GMFLTLTGKIISTLSSKSLPGDVHVFYDEAMKKLFGASNLTADLVCLMNCQDRMLSHLAA
KCMASFVMYDINNSIGSDPVWKTAFTETFQSSAPNCALDTHLWALTEVIKRILKLDCVNK
REILMKLLADFESSLTSLYPKLLFQDSPQHTHAAENDRDSVDLELSVCALLDLVEVLSAA
RRWHGLCSSIQRLAFLQTSALLHLTLSNMKEFVKKRALLLLKRILVQRAGEEWGFGDNHS
NECDEEYCTDLLVMADAVLQEVEAGWLRKFHVKTQASFFGGNKVNVSDGEMKDAVMLRAV
SLILIKCLEIKARHVSTQGAQRAFDVQSCLMELLAFLQQQVLQVKAVTHPCSWILVVFAD
QDDDLIESAKVLITLYLHQRSLSSSDSAACEWGCNPHCHFTLLLRSLSFDHTVLLDFLIS
DETCFLEYCVLYLKHLRDHWQDFCNACSCIENSTTETHTLSLPHFSEASVKSQLHYDPQF
KVVGFRQSLVDYENSDDSEDEDKRLSNLQMSRNDEEPVAEIDMRKAGAQAVSASADTMEK
ISTASTEGLRGKVVLCLAELRIVISRLHSKGLFPYNPSCLLKLLLAIETKGQLENPTALQ
LK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggattcacaacattcagacttacaggctgtgttcacagatttacggtctgga
gttgttcctgctatgagcactgaggaactcgcaagtcagatttcatcagccataaactgt
tctttgcacattttactacaatctccacacagcatgacaagtgaagacacagagatgact
ggcatgttccttacactcactggaaaaatcatctccacgctgtcttcaaaaagtctgcca
ggagatgtccacgtgttctatgacgaggccatgaagaaactctttggggcctctaacctg
acagctgatcttgtgtgtctgatgaactgccaggacaggatgttgtctcatttagctgcc
aaatgcatggcttcttttgtcatgtatgacatcaataattctattggtagcgacccggta
tggaagaccgccttcacagaaacatttcagagttcggctccgaactgtgccctggacaca
cacctgtgggctctgacagaagtgattaaaaggatactgaagttagactgtgttaacaaa
cgagagattttgatgaaacttcttgctgattttgagtcatccctcacttccttgtatcca
aagctactctttcaagacagtcctcaacatacgcatgcggcagaaaatgacagagactca
gtcgatttagagctcagtgtatgtgcactcctggaccttgtagaagtcctcagtgctgct
aggaggtggcatggcctctgttcctccattcagagactggcgttcctccaaacttcagca
ctcctccacctgacgctctccaacatgaaggaatttgtaaagaagcgagcacttcttttg
ctgaagcggattctcgttcagagagcaggggaagaatggggttttggtgataatcactct
aatgagtgtgatgaggaatattgcactgatttgcttgtgatggctgatgctgtgctccag
gaagtggaagctggttggcttcggaagttccatgtcaaaactcaggcgagtttctttggt
gggaacaaagtgaacgtttcggatggagaaatgaaagatgctgtgatgctcagggctgtg
agcctgattctgatcaagtgtctggagattaaagctcggcatgtttctactcaaggagct
caacgtgcctttgatgttcagtcttgtcttatggaactgctggcttttctccagcagcag
gtgcttcaggttaaagcggtcacacatccctgctcttggatcttagtagtgttcgcggac
caggatgacgacctgatagaatcagccaaggttttgattaccttgtatttacatcagaga
agtttgagttcatcagacagtgcagcatgtgaatggggatgtaaccctcactgccacttt
actctcctactccgaagtctctccttcgaccacactgtcctcctggacttcctcatttcc
gatgaaacctgctttttggagtactgtgtcctctacctgaagcacttgcgtgaccactgg
caagatttctgtaatgcatgttcttgtatcgaaaactctacgactgagacacacactctg
tccctcccacatttttctgaagcttcagtaaaatcacaacttcattatgaccctcagttt
aaagttgttggattcaggcaaagtctggtggattatgagaactcggatgattctgaggac
gaagacaaacgcctgtcaaacctccagatgagcaggaatgatgaggaaccagtagcagag
atcgacatgagaaaagcaggagcacaggctgtgtctgcatcagcagatacaatggagaaa
ataagcactgcctccactgagggtctgagagggaaggttgtgttgtgccttgctgagtta
aggattgttattagtagacttcacagcaaggggctattcccatacaaccctagttgtctt
cttaaattgctgctggctattgagactaaaggtcaattggaaaacccaacagcactgcaa
cttaaataa
DBGET
integrated database retrieval system