Ictalurus punctatus (channel catfish): 108271245
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Entry
108271245 CDS
T04658
Symbol
rab11ba
Name
(RefSeq) RAB11B, member RAS oncogene family, a
KO
K07905
Ras-related protein Rab-11B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108271245 (rab11ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271245 (rab11ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108271245 (rab11ba)
04031 GTP-binding proteins [BR:
ipu04031
]
108271245 (rab11ba)
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
108271245 (rab11ba)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108271245 (rab11ba)
Exosomal proteins of other body fluids (saliva and urine)
108271245 (rab11ba)
Exosomal proteins of colorectal cancer cells
108271245 (rab11ba)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
108271245 (rab11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
PduV-EutP
Csa3_N
Gtr1_RagA
AAA_16
ABC_tran
AAA_14
NTPase_1
FeoB_N
TniB
AAA_24
AAA_21
DUF3289
MCM
FAD-SLDH
Motif
Other DBs
NCBI-GeneID:
108271245
NCBI-ProteinID:
NP_001316247
Ensembl:
ENSIPUG00000025100
UniProt:
E3TEJ5
LinkDB
All DBs
Position
10:13839563..13847601
Genome browser
AA seq
218 aa
AA seq
DB search
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQ
IADRSAHDESPGNNVVDISVPPTTDGLKGSKFQCCQNL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccgagacgatgagtatgattatttatttaaagtggtgctcattggagactct
ggtgtggggaaaagtaacctgctatcccgtttcacacgcaatgagttcaacttggagagt
aagagcaccatcggtgtggagtttgctactcgaagcatccaagtggatggtaaaaccata
aaagctcagatttgggatacagcaggacaagagcgctacagagcgattacatcagcgtac
taccgaggtgcagtaggagctcttctggtgtatgacattgccaagcacctgacctatgag
aatgtagagcgctggctgaaggagctgcgtgaccatgcagacaacaacatcgtcatcatg
ttagtgggcaacaaaagtgacctgaggcatctccgagccgtgcccactgacgaggcccgg
gccttcgcagaaaagaacaacctgtctttcattgagacttcagctttggactccacaaat
gttgaagaggctttcaaaaatatactcacagaaatctaccgtattgtaccacaaaagcag
atcgcagacaggtctgcgcatgacgagtctcccggcaacaatgtggtcgacatcagtgtc
ccccctaccactgatgggctgaaaggcagcaaattccagtgctgccagaacctgtga
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