Ictalurus punctatus (channel catfish): 108271260
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Entry
108271260 CDS
T04658
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108271260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271260
03036 Chromosome and associated proteins [BR:
ipu03036
]
108271260
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
108271260
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108271260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
AT_hook
Motif
Other DBs
NCBI-GeneID:
108271260
NCBI-ProteinID:
XP_017334200
UniProt:
A0A2D0RW82
LinkDB
All DBs
Position
1:complement(26744454..26817144)
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AA seq
665 aa
AA seq
DB search
MMQGEDRKKRKPNLNPRSVSEEYCLRERPKEDTTRMKNKLSTSVVNSKKRPWSWDQYLDE
ERAIAAPPRLFTECQSFPCSKNGFKIGMRLEGIDPLHPSMFCVLSVAEVIGYRLRLHIDG
YSECYDFWVNADSPDIRPAGWCESAGRKLHPPKGYKMNEFNWEKYLDSCNAQAAPKNLFK
SQTSTNTTSKFEVGMKLEAVDRKNPCLVCVASVADIVDNRFLVHFDNWDDTYDYWCDASS
PHIHPVGWCQDHGRPLTAPQGHPNPEHFVWEEYLEDNGASAVPSQAFCMRTPHGFQNNMK
VEVVDRRNPMLIRVASIVDTEDYRVKVHFDGWHSKFDFWVDSDLPDLHPVGWCARTGHPL
EPPLTNAGPSDLKSSMTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEVVLP
DRLGGEKQITFVPVHFVQKTKRLCAEQEEEEVNDKDSHEENREELSGCDTAPRPRGRPPG
HATIKREYKEEPSSQGQKAYSLLGKRSRLTTRIAQSTKYLRIKDEEEEIELNSMIAEKNV
DSLQQALHQSVFLSAMSAQPGRDLPLCWEQHCKLLPGVAGVQASRVAHWTVEEVADFIHS
LPGCEEQAKQFREEQIDGKAFLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDNQSAS
SDTNT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagggagaggaccgaaagaaaaggaaaccgaatttgaatcctagaagtgtgtct
gaggaatactgtctcagagaacgtccgaaagaagacacgacaaggatgaaaaataaactg
tccacttcagttgttaacagtaagaaaaggccctggtcatgggatcagtacttggatgag
gaaagagccatcgcagcccccccgagactctttactgagtgccagtcatttccttgcagc
aagaatggctttaaaataggaatgaggctagagggaatcgaccccttgcatccttccatg
ttctgtgtgctctccgtggctgaggtgattggctaccgtctgcgtctgcacattgacggt
tactcagagtgctatgacttttgggttaatgctgattcccctgatatccggccagcagga
tggtgtgaatccgcaggtcgcaaactacaccctccaaaaggttataagatgaatgagttt
aactgggaaaaatacttggactcttgcaatgctcaggctgcaccaaagaatctgttcaaa
tcccaaaccagtactaacaccacctcgaaatttgaagtgggcatgaaactggaggcagtg
gacaggaagaacccctgcctggtgtgtgtggcctctgtggccgacatcgtagacaaccgc
ttcctggttcattttgacaactgggatgacacatacgattactggtgtgatgccagtagc
ccccatatccaccctgtgggctggtgccaggaccatggacgacctctcacagcacctcag
ggacacccgaatccagagcatttcgtatgggaggagtatttagaagacaatggtgcttct
gcagttccgagccaagccttttgtatgagaacgcctcatggatttcagaacaacatgaag
gtagaagtggtggacaggagaaaccccatgctgatccgcgtggcctccattgttgatact
gaagactacagagtcaaggtgcactttgatggctggcactccaagtttgacttctgggtc
gactcggacctgccagaccttcatcctgtaggctggtgtgcgaggacgggtcacccactg
gaacctccactgacaaatgcaggaccttctgacctcaagagctccatgacgcagggagtg
tgtccaaccccaggctgcaggggagtgggccacatcaagggtgcaaaatacacaggacac
cacagtgccttcggctgtccctactcggacattaacatgaagaaggaggtagtgctgcct
gatcggctcggtggtgaaaaacaaatcacctttgtcccagtgcacttcgtgcagaaaacc
aagaggctgtgtgctgagcaagaggaggaggaggtgaacgataaagacagccatgaggag
aacagggaagagctgtcaggctgtgacacagcgcctcgtcctcgcggtcggccccctggc
catgccacaataaagagagagtacaaggaggaaccttcatctcagggacagaaggcatac
tcgctgctggggaagcgtagccgcctgaccaccaggattgctcagtcaacaaaatatctg
cgtatcaaagatgaggaggaggagattgagctaaatagcatgattgcagagaaaaacgtg
gacagtctccagcaggccctgcatcagtcggtcttcctgtcagccatgtctgcacagcca
ggtcgtgacttgccgctgtgctgggagcagcactgtaaactccttcccggcgtggccggg
gtgcaggctagccgtgtcgcccactggacggtggaggaggttgctgacttcatccactct
ctcccaggatgtgaggaacaagccaagcagtttagagaggagcaaatcgacggcaaggcc
ttcctcctcctcacacagcgggacatcgtgaagatcatgagtgttaagcttggccctgct
ctcaaaatctacaattccatcctaatgttcaagcacgctgaagacaaccaatcagcaagc
agcgataccaatacatga
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