Ictalurus punctatus (channel catfish): 108271262
Help
Entry
108271262 CDS
T04658
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271262
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108271262
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
108271262
Nuclear receptors [BR:
ipu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
108271262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
FliG_M
ZnuA
SelP_N
Motif
Other DBs
NCBI-GeneID:
108271262
NCBI-ProteinID:
XP_017334199
Ensembl:
ENSIPUG00000019534
UniProt:
A0A2D0RUN2
LinkDB
All DBs
Position
10:4132184..4182901
Genome browser
AA seq
544 aa
AA seq
DB search
MSSSSEGEVGQSDSCDVPCLGGSPDRAASLLHFSGAVMLPKVESDCLGLARSHGEQGHIP
ANMQAPQFKMMDYSYDEDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCI
ENQSCQIDKTQRKRCPYCRFQKCLNVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQKK
ALIRASGLKLEAMNHTVQTAPADLTISSAIQTIHSASKGLALSHHHHHHHHHHQHHQHHQ
HHQSSSDYDRSPFVPSPVSMAMPPQGYQAYGHFQSRAIKCEYPDPYGSSPESLMGYAYAE
APGFPRLVAELLKCEPDEPQVQAKILAYLQQEQAGRSKHDKLNTFGLMCKMADQTLFSIV
EWARSSIFFRELKVDDQMKLLQNCWSELLILDHIFRQVMHTKEGSILLVTGQQVDYALIA
SQAGATLNNLLSRAQELVSKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLVESVQEQV
NAALLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLLIEMLH
AKRT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagttctgagggtgaagtaggacaaagtgactcctgtgatgtgccatgttta
ggtggatcgccggacagagcggcgtctcttcttcattttagcggagctgtcatgctgccc
aaagtcgagtcagactgcctgggactcgctcggtcgcatggggaacagggccatattcct
gcaaacatgcaagcccctcagtttaaaatgatggactactcctacgatgaagacctggat
gagatgtgtcccgtgtgcggagacaaggtgtccggatatcactatggcctgctcacctgt
gagagctgcaagggcttcttcaagcgcactgtgcagaacaacaagcgctacacgtgtatc
gagaaccagagctgtcagatagacaagacacagcgtaagcgctgcccttactgccgcttc
cagaagtgcctcaacgtcggcatgaagctggaagctgtgagggcggaccgcatgcgcggc
ggtcgcaacaagttcggccccatgtacaagcgggaccgtgcgctcaagcaacagaagaaa
gcactgatccgtgcaagtggcctcaaactggaagccatgaaccacaccgtgcagaccgca
cccgctgacctcactatatcttccgccatccagaccatccactcagcttccaaggggctg
gcactgagccaccatcaccaccaccaccaccatcaccaccaacaccatcaacatcaccag
catcaccagtccagctccgactatgaccgcagcccctttgtcccgtcacccgtcagcatg
gccatgccaccgcagggctaccaggcatatgggcacttccagagccgagccatcaagtgc
gagtaccccgatccgtatggcagctcacccgaatcgctgatgggctacgcatacgccgag
gcgccaggcttcccgcgcttggtagcagaactgctcaagtgtgagcctgatgagccgcaa
gtgcaggccaagatcctggcctacctgcagcaggaacaggccggccgcagcaagcacgac
aagctcaacacgtttggcctcatgtgcaagatggctgaccagacgctcttttctatcgtc
gaatgggcacgcagtagcatcttcttccgtgagctgaaggttgatgaccaaatgaaactt
ctccaaaactgctggagcgagcttctcatccttgaccacattttccgacaggtgatgcac
accaaggagggctccatcctgctggttacagggcaacaggtggattatgcgctaattgcg
tctcaagctggggccacactcaacaacctcctgagtcgggcgcaggagctggtgagcaag
ctgcgctcccttcagctggatcagagagagttcgtctgcctcaagttcctggtgctgttt
agtctagacgtgaagaacctggagaacttccacctggtggagagcgttcaggagcaggtg
aacgcggcactgctcgattacgtcatgtgcaactacccgcagcagacagataaattcggc
cagctgttgctgcggctgcctgagatccgcgccatcagcctgcaagccgaggaatacctt
tactacaagcacctgaacggcgatgtgccctgcaacaacctgctcatcgagatgctgcat
gcaaaacgcacctga
DBGET
integrated database retrieval system
