KEGG   Ictalurus punctatus (channel catfish): 108271283
Entry
108271283         CDS       T04658                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108271283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108271283
Spliceosome [BR:ipu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108271283
 Complex B
    108271283
 Complex C
   U2 SnRNP specific factors
    108271283
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_8 LRR_4 LRR_14 LRR_NXF2 LRR_NXF1-5
Other DBs
NCBI-GeneID: 108271283
NCBI-ProteinID: XP_017334245
Ensembl: ENSIPUG00000023040
UniProt: A0A2D0RWB7
LinkDB
Position
10:complement(21304215..21311039)
AA seq 285 aa
MVKLSAELVEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDFSDNEIRKLDGF
PLLRRLKTVLMNNNRICRIGENLEHSLPNLKELILTSNNIQELGELDPLASVKTLTLLSL
LRNPVTNKKHYRLYVINKLPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKRTKT
FTPGAGLQAEKVKSGPSAADVEAIKAAIANATSLAEVERLRGMLQSGQIPGRESRQGAQS
MVEEEEEDEPEMGMQESVPMYNATGDAMEDDGMENGEEDMHVNGS
NT seq 858 nt   +upstreamnt  +downstreamnt
atggtgaagttgtcggcagagttggtcgagcaggctgctcagtacacgaatccggtccga
gacagagagctggacctccgaggttataaaatcccggttttggagaacctcggcgctact
ctggatcagtttgataccatcgacttttccgataatgagatcagaaagctggacggattt
cctctgctcaggagactcaaaactgtgctgatgaacaacaaccgcatctgccggatcggt
gaaaatctcgagcactcgttgcccaatcttaaggagctgatccttacaagtaacaacatc
caagagctgggtgagctggatcctctcgcttcagtaaagaccttgactcttctcagtctc
ttaaggaacccagtaaccaacaagaagcattacaggctgtatgtcatcaacaaacttcca
cagatccgcgttctggatttccagaaggtgaaattaaaggaacgtcaagaggctgagaaa
atgttcaaaggaaaacggggcgctcagcttgcaaaggatattgccaagcgcacaaaaacg
ttcacgccaggagccggactgcaggctgagaaagtgaaatcggggccttctgcggcagac
gtggaagccattaaggctgccattgcaaatgccacatcgctggctgaggtggagaggttg
aggggaatgttgcagtctggtcagatccccgggagggaaagcagacaaggtgcacagagc
atggttgaggaagaagaggaagatgagcctgaaatggggatgcaggagtctgtgccgatg
tacaatgccactggggatgcgatggaagatgatggaatggaaaacggagaggaagacatg
cacgttaatggatcgtag

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