Ictalurus punctatus (channel catfish): 108271318
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Entry
108271318 CDS
T04658
Name
(RefSeq) large subunit GTPase 1 homolog isoform X1
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108271318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108271318
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
GTPases
108271318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
RsgA_GTPase
FeoB_N
AIG1
cobW
Motif
Other DBs
NCBI-GeneID:
108271318
NCBI-ProteinID:
XP_017334316
Ensembl:
ENSIPUG00000008631
UniProt:
A0A2D0RVV9
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Position
10:complement(8160971..8169776)
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AA seq
629 aa
AA seq
DB search
MGKKKGRGDGTGLGRALMKERLNAVRGHRRNDTWLHTSELNDGYDWGRLNLQSVTEQSSL
DDFLATAELAGTEFTAEKLNIRLVPAEARSGLLTAEESKRLKKLHDDNRQFLRIPRRPHW
DENTSPELLQQAERDSFLTWRRELARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQ
IVDARNPLLFRCPDLEKYVEEVSSHKVNMLLLNKADLLTREQRRAWAKHFQKEGIRAAFW
SALAEAQRLDAEEKGEDLDDLQESSDAECRAAQASEERSREDEEDDEEEDTTASFEDCTS
DVDWQTCSEGSGDEKDEEKCAASSACASFYNSSRLLRKDELLEMFKSAHTGPKCKNGQFT
VGLVGYPNVGKSSTINTIFRNKKVSVSATPGHTKHFQTLFVEPGLCLCDCPGLVMPSFMS
TKAEMICSGILPIDQMRDHVPAISLVCQTIPRAVLEGTYGINIVRPREDEEPDRSPTSEE
LLSAYGYMRGFMTAHGQPDQSRSARYVLKDYVTGKLLYCHPPPLINAKDFQPQHLKFVNQ
TIKSGPSTCTNKPPKIKQIENTVDKTFFHQENVRALTKGVQMVMGYKPGSGPQAQGKAGA
EQQAGKPWKKHGNRNKKEKVRRLNKHLDA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaagggtcgtggagatggtacgggtttagggagagctttaatgaaggag
agactcaatgcagtccgaggacaccgaagaaacgacacatggctccacaccagcgaactg
aatgacggatatgattggggtcgcctgaatttgcagtctgtaacggagcagagctcgttg
gatgattttctggccacggctgaactggcaggaacagaatttactgcagagaaactgaac
atcagattggtgccagctgaagccaggagtggcctactgacagctgaggaatccaagaga
ctgaagaagctccatgatgacaacagacagttcctccgcataccacgaagaccgcactgg
gatgagaacacaagccccgagctcctccagcaggccgaaagagacagcttcctgacatgg
agacgagagctggcaaggctggaggaggaacagaaactgattcttaccccttttgagagg
aacctggatttttggaggcagctttggagagttatcgagagaagtgatgttgtggtccag
atagtggatgccagaaaccctttgctgttccgatgtcctgatctagagaaatacgtcgaa
gaggtctccagtcacaaggtgaacatgctactgttgaacaaagcagatctgcttacccga
gagcagcgtcgtgcctgggccaagcattttcagaaagaaggcatcagagcagcgttctgg
tctgcgctggctgaggcacagcggctggacgccgaagaaaagggagaagatctcgatgac
cttcaggagtcaagcgatgcagaatgtagggcggcccaggcctcagaggaaaggagtcga
gaggacgaggaagatgacgaagaagaggacacgacagcgagttttgaagactgcacttca
gatgtagactggcaaacctgctctgagggatcaggagacgaaaaggacgaagagaagtgt
gcagcctcttcagcttgtgcttctttttataactcgagccgtctgctgcgcaaagacgaa
ctgctggaaatgttcaaatctgcacatactggacccaagtgtaagaacggccaattcaca
gtaggactggtgggttatccgaatgttggcaaaagctccaccatcaacaccatctttagg
aataagaaagtctcggtgtcagcaacacctggacacacaaagcactttcagacattgttt
gttgaaccgggtctttgcctgtgtgactgtcctggcctagtcatgccttccttcatgtcc
accaaagccgagatgatctgcagcgggattctccccatcgaccagatgcgagaccacgtc
ccggccatctctctcgtttgtcagacaattccacgagctgtgctggagggaacctacggc
atcaacatcgtcagaccaagagaggacgaagagccagatcgctcgcccacctctgaggaa
ctgctttcagcttatggatatatgaggggcttcatgacagcacacggtcagccagaccag
tccagatctgcccgctatgtcctgaaagactatgttaccggaaagctgctctattgtcac
cctcctcctctcatcaatgctaaagacttccagcctcagcacttgaagtttgtaaaccaa
actattaagagtggtccttccacgtgtaccaataaacctcccaagatcaaacagattgaa
aacactgttgataaaactttctttcaccaggagaacgtccgggcactaacaaagggagtg
cagatggtgatgggctacaaacctggcagtggcccacaagcgcaaggaaaagcaggcgca
gaacagcaagctgggaaaccttggaaaaagcacggcaacaggaacaagaaggagaaagtg
agaagactcaataaacacctggacgcttga
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