Ictalurus punctatus (channel catfish): 108271436
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Entry
108271436 CDS
T04658
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108271436
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108271436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
NACHT
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Nup120_160
AAA_16
DUF4062
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
NPHP3_N
PQQ_2
Beta-prop_DCAF4
NPHP3
AAA_22
ATPase_2
APAF1_C
AAA
Beta-prop_NUP159_NUP214
Bac_DnaA
nSTAND3
AAA_25
KAP_NTPase
RuvB_N
Motif
Other DBs
NCBI-GeneID:
108271436
NCBI-ProteinID:
XP_053539257
UniProt:
A0A9F7RFK6
LinkDB
All DBs
Position
10:8510487..8524165
Genome browser
AA seq
1611 aa
AA seq
DB search
MELREALGVEVLRGHNSDGLEPSSSVVRVFISSTVSDLNTERNAFWEKAYPELQSYCQSL
GLVFEVVDFQWGLRDSVTVDHLTTELCLREIQSCQKLSLGPSCIAMVGSQYGHRLIPHLI
SEIEFELLLSKLSKDQEGLTVLKKWFIKDDNSVPPKYVLQPITTHYPHYNDTKPEARPQH
ESDILSWNLTEARLLQLLCSAALQAENDGDFSAEQKHKFFKSMTEWEMEQSFLSTQEQDT
LSPVIFIRELPHLKKSESHKHAKFLDVTADGLIDTEAQELLTKLKQRISSVCSSYLTLEL
SKNAMDVNRKEHKEYLERFCEQIVCQIKERIAKQSVPPTGPGWLWIQQELFHHARLSKDK
CAIFIGRDGPLAKLCLTMWESTNIQHAPLVIYGHPGIGKTALLCKLAQEMRTVLDPQAVV
VLRLLGTSPISSDVDSVLKGICLQVCGALGLATPCPKTANTHEKLVKFFHAMLHKVSEDG
ETLVLILDSLDDLSRANNAHKLHWIPKEIPPNVHLVVSTLYDGSPFKRLKTLVSDDKCFF
EVEPLNCDQGQDIINACLNGAGRRLLPEQTHAITGNFQKSGSLLHLKLMVDMAKQWSSYT
SMSDIHLGSSVQEVISLFLQTLEKKHGEKLVRHALGYITLSRRGLSEAELRDVLSVDNDV
LAEVYQSRLPPSHTLIRFPPLLWARLRHDLRDHLVERWENGIIVLVFNRRQFTDIVKAKY
LSVEYRVQMHSVLSEYFSGQWSQGKLKPILLSSLSTQLNADRKVPHQPLWYAEGVANLRM
LHELPYHLIHAGKWEELRHSLLGNLDWLYCKTLSCGVASVIQDLSLCVDIIDCPEIQLIR
DCFLLLKPTIDFIDGHTDSLLLFTEITARLQALAPEYPSLIGRLCSQCNERFASCADPVL
VPKSSFLQPPGGPLINTLSGSAKGITAVDLCLERELLIAGSLDGELIAWDLKCLEMLHTI
DGHTGTVQSVKFVKKGEHCLSTGLDGSLRKWSLLTGKQLFSIPAVVSVQPWPTEQIIVLE
PKAMVLSNTQGQVKSWNLDTGELLYEIDVKGECSILSALADEVAVMSSDGQIWIFDSNTG
LEKSYNKLTCAQGFTVSSVLSLPRHGKLLIASQECSVNMVSASGSVCEVELPAPASFMCT
SEDENVLFAGCERTLAVLHMNPESVHKTQELQHEATVLSAVSFSQGSKVVTGSQDQIIRV
WGLVTGHLLDSFSGMGSPVTFVSVYNSTIISASTRSGHLKLWQLDYDPKHKIQTGIPANC
PRVVISKDGSTVHFIREEDRAKVFAWNCSEGMSSDTMDVCAEVCCMELAQEKQLLFCGLC
TGTVLIYPLAFPQETLCLPPPESLPTVRSMAISPREDKIAVAYKDMVCLFEITARDSFPC
VEGPIHNYSLSLLHLPVSAMALLPDCRLLYGTFGGEVAIYDFKSATTAELDQHRAAITCI
ALSNWDKHALVGSEDCVQKLWNMSPVLLDHTMEYKGFYFEGILCAAFSVNDKYVFTGSRD
KTIKVWDVSTGSLLYIQYVYAAVIRIAPYKDGFVAISQLGSFIKEGFHCPNTLTQGYNPL
RNFRAHYRVTSREKSLETPHSEITGLYGYNPAQFNFMSILKTKQSSTCVLL
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagggaagctctgggagtcgaggtgctgcgcggacacaactcggatggtctg
gagccttcgtccagcgtggtacgagtgttcatcagctcaacagtctcagatcttaacact
gaacgaaatgccttttgggaaaaagcctatcctgagttacaaagctactgtcaaagtctt
ggcctggtatttgaggttgtggatttccagtggggtttgagggattcagtcactgttgat
cacctaacaactgagctgtgtcttcgggagatccaatcatgtcagaaattgtcgcttgga
ccaagttgtattgctatggttggcagtcagtatggacacagactcattccacacctcata
tcagagattgagtttgagttactgctctcaaaactttccaaggaccaagaaggcttgaca
gtacttaagaaatggttcatcaaagacgataactctgtaccccctaaatatgtccttcag
ccaatcaccactcactatcctcattataatgatacaaaacctgaggctagaccacagcat
gaatctgacattttgtcctggaatctcactgaagctcggttattgcagctgttatgcagt
gcagcgctgcaagccgagaatgatggcgacttcagcgcagagcagaagcacaagttcttc
aagtcaatgacggaatgggagatggagcagagttttctctcaactcaagagcaggacacg
ctttcacctgtcatctttatcagggaactacctcatttaaagaaaagtgaaagccataag
catgctaagttcttggatgtcacagctgatggtctcatagacactgaagcccaggaactc
ttgaccaaactaaaacagcgtatctccagtgtgtgttcaagttatctcaccttggagctt
agtaaaaatgctatggatgtgaatcgtaaggagcacaaggagtatctggagagattctgt
gaacagattgtatgtcagataaaggagaggattgccaagcaatctgttccaccaacaggt
ccggggtggctgtggattcaacaggagctttttcatcatgcaaggctcagtaaagacaag
tgtgctatttttattggaagagatggtccactggcaaagctctgcctcacaatgtgggag
tcgacaaatatacagcatgcaccactcgtaatctacgggcatccaggaattggtaagacc
gctctgctgtgtaaactggcccaggagatgcggactgttctagatccacaagctgtggtg
gttctccggctgcttggaacatctcccatcagctcagatgtagactctgtcctaaagggg
atttgtttacaggtttgtggagctttgggactggcaactccctgcccaaagactgcaaac
acacatgagaagttggtaaagttcttccatgccatgctgcacaaagtgtctgaagatgga
gaaacactagttctcatcctggactctttggatgacctctcacgggccaacaatgctcat
aaattgcattggatacctaaagaaattcctcctaatgtacatttggtagtgtctacccta
tatgacgggtctcctttcaagagattgaaaactctagttagtgatgataaatgtttcttt
gaagtagaaccactgaattgtgatcaagggcaggacatcatcaatgcctgtctgaacggt
gcgggaagaagacttctgcctgagcaaacacatgcaatcactggcaacttccaaaagagt
ggaagtcttttgcatctgaagctaatggtggacatggcaaagcagtggtcatcctacacc
tccatgtctgatattcatcttggcagctcggttcaggaagtaatctcactgtttctccag
acactggaaaaaaaacatggtgagaagcttgtccgccacgctctgggttacatcacctta
tcgagacgtggcttgtcggaggcagaactacgtgatgtcttgtctgtggataatgatgtt
ctggcggaggtctaccagagccggcttcccccgagccacaccctcatacgctttcctcct
cttctttgggcacgcctcagacatgacctaagagatcacctagtcgagcgttgggaaaat
ggcattattgtgttagtgttcaaccgaaggcagtttactgacattgtgaaggcaaagtat
ctttctgtggagtaccgagttcaaatgcacagtgttctcagtgaatacttctcaggtcag
tggagccagggcaagctcaaacccatacttctgtcatcgctgagtacccaactgaatgct
gacagaaaggttccgcatcagcccctatggtatgctgaaggagtggccaatctcagaatg
ctgcacgaactgccttatcatcttatacatgcaggcaaatgggaggaactgcgtcactcg
ttgctaggcaatttggactggttgtattgtaagaccctcagctgtggtgtggccagtgta
attcaggacctgtcactctgtgttgacatcatagactgtcctgagatccaattgatcagg
gactgctttctactgctgaagcctaccatagatttcatcgatggacacacagactcgctc
cttctattcactgagatcactgccaggcttcaggctctggctcctgagtacccttcgctg
attgggcgcctatgctcgcagtgcaacgagcggtttgcttcctgtgcagacccggtgctt
gtgcccaagagtagcttcttacaaccccctggaggacctttgataaacaccctcagtggt
tcggcaaaagggattactgcagtagatctatgtttggagagagaattactgatagcaggt
tcactggatggagagttgattgcatgggacctaaagtgtcttgagatgcttcatacaatt
gacggacacacaggtacagtgcagtcagtgaagtttgtaaagaaaggtgaacactgcttg
tctactggacttgatggctctcttagaaaatggagtctgctcactgggaaacagctcttc
agcattcctgctgtggtctcggtacaaccctggcctactgaacagatcattgtgcttgag
cccaaagcaatggtcttgtccaacacacagggacaagtcaaatcatggaatttagacact
ggagagcttctttatgaaattgatgtaaaaggagagtgttcaatccttagtgcactggcg
gatgaggtggcagtcatgtccagtgatggccaaatctggatctttgattcaaatactggc
ctagaaaaatcctacaataagctcacctgcgctcagggtttcactgtatccagtgtgctt
tcactcccccgacatggaaaactcctcattgcatctcaggagtgctcagtgaatatggtc
tcagccagtggttctgtatgtgaagttgagcttcctgcacccgcttcatttatgtgcact
tcagaagatgaaaatgtgctctttgcaggctgtgagagaacactggctgtgctacatatg
aatccagagtctgtgcacaagacccaggagctccagcatgaagccacagtcttatcagct
gtttcattcagccaaggaagtaaagtcgttacgggatcacaggatcaaatcatacgggtt
tggggtttagtcactggacacctcctcgactccttcagtggtatgggatctcctgtcacc
ttcgtgtctgtgtacaacagcacaatcatctcagcctcaaccaggtctggtcacctcaaa
ctgtggcagctagactacgatcccaaacacaaaatccagaccggtattcctgccaactgc
ccgagggtggtaatatccaaagatggcagcacggtacatttcatcagagaagaggacagg
gccaaggtgttcgcatggaactgttctgaaggtatgtcctccgatacaatggacgtgtgc
gcagaggtgtgttgcatggaactggcacaagagaagcagcttctcttctgcggcctctgc
accggtactgtactcatctaccctttagcctttccccaagagaccctgtgccttcctcct
ccagagagtctgcccactgtgcgcagcatggccatcagtcccagggaagataagattgcc
gtggcctataaggacatggtgtgcttgttcgagatcaccgcaagagacagcttcccatgc
gtcgagggtccaatccataactactcactctccctgcttcacttgcctgtatcagccatg
gctttgctgcccgactgtagactcctgtatggcactttcggaggggaagtggcaatctat
gacttcaagagcgccacaacggcagagctggatcagcacagggctgcgatcacctgcatt
gcactgagtaactgggataaacatgctctggtaggatctgaggactgtgtccagaagctt
tggaatatgagtcctgtgctgctggaccatactatggagtacaagggtttctatttcgag
ggcattctgtgtgcagcgttctctgtaaacgataagtacgtgttcactggttctcgggac
aaaaccatcaaagtctgggatgtttctacaggatcccttttatacatccagtatgtttat
gctgcagtcatcaggattgcaccctacaaggatggctttgtagccatttcacagcttggc
tctttcatcaaggagggcttccactgtccaaacacactgactcaaggctacaacccgctc
cgtaacttcagagctcactatcgcgttacttcacgtgagaagagtctagagacacctcac
tccgagattacagggctctacggttacaatccagctcagtttaacttcatgagcattctc
aagactaaacagtccagcacatgtgtccttctatga
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integrated database retrieval system
