Ictalurus punctatus (channel catfish): 108271514
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Entry
108271514 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108271514
04082 Neuroactive ligand signaling
108271514
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108271514
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108271514
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
108271514
NCBI-ProteinID:
XP_017334626
Ensembl:
ENSIPUG00000022064
UniProt:
A0A2D0RWR2
LinkDB
All DBs
Position
11:26858149..26915141
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AA seq
505 aa
AA seq
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MFGMFGMFGIGKRKLFGIISVPLLVALMCCAQSVNEPGNMSFVKETVDKLLKGYDIRLRP
DFGGAPVSVGMTIDVASIDMVSEVNMDFTLTMYFQQYWRDKRLAYTGIPLNLTLDNRVAD
QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQN
CTLEIESYGYTTDDIQFYWNGGDNAVSGVSQIELPQFSIVDYRLVSRNVVFSTGAYPRLS
LSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLR
ETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQMQKKMAEKAEKANNDRT
KYDGNKSVQEGGNCKASGVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGNEITTSV
SDARNSTSVMLDNSGIQYRKASGPRRHSVERNAQPKKARLRRRSSQLKIKIPDLTDVNAI
DRWSRIIFPAVFSLFNLIYWLYYVN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatgtttgggatgtttgggatcgggaagagaaagctattcgggatcatttcc
gtgccgctcctggtggcactgatgtgctgcgctcagagcgtcaatgaaccaggtaacatg
tccttcgtgaaagagaccgtggacaagctgctgaagggatatgacatccgtctccgacct
gactttggaggagcgccagtgtcagttgggatgaccatcgacgtggcgagcatagacatg
gtgtctgaagtcaacatggacttcacgttgacgatgtatttccagcagtactggagggat
aagcgtttagcgtacacggggattcctctgaacctgaccctggataacagagtggctgat
cagctgtgggttcctgacacctacttcctgaacgataagaagtccttcgtccacggcgtg
acggtgaagaaccgcatgatccgccttcacccggacggaaccgtcctctacgggctgaga
atcaccacgactgctgcttgcatgatggacctgaggagatacccgctggatgagcagaac
tgcaccctggagatagagagctatggctacacgaccgacgatatccagttctactggaat
ggaggagacaacgccgtatccggggtgtcccaaatcgagcttcctcagttctccatcgtg
gactacagactggtgtcccggaacgtcgtcttctccacaggagcttatccacgcctgtca
ctcagcttcaagctgaagaggaacatcggatatttcatcctgcagacctacatgccttcc
atcctgatcaccatcctgtcctgggtctccttctggattaactacgatgcttcagcagcg
agagtagctttaggtatcacgaccgtccttaccatgaccaccatcaacacccatctccga
gaaacgctgcccaagatcccgtacgtcaaagccatagacatgtacctgatgggctgcttc
gtcttcgtcttcttagcgctactcgaatacgccttcgtcaattatatcttctttggacga
ggccctcagatgcagaagaaaatggcagagaaggcagagaaagccaacaacgaccgcact
aaatacgacggaaacaagtctgttcaggagggagggaattgcaaagcgtcgggagttaaa
cagtccaatcaggtacaaggtcaccgtcactcacgaggggtggactctcaggggaacatc
ctgctgaccacgctggagatccataatgaagtggctgggaacgagatcactaccagcgtc
agcgatgcgagaaactccacctccgtgatgttggataactcagggatccagtacaggaag
gcgagcggaccacggcggcacagcgtggagcgaaacgcacagcctaaaaaggctcgactg
cgcagacgctcttcacagctgaagatcaaaatcccggatcttacagacgtcaacgccatc
gatcgatggtcacggataatattccccgccgtgttttcccttttcaatctcatctactgg
ctttactacgtgaattaa
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