Ictalurus punctatus (channel catfish): 108271515
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Entry
108271515 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108271515
04082 Neuroactive ligand signaling
108271515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108271515
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108271515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
108271515
NCBI-ProteinID:
XP_017334629
Ensembl:
ENSIPUG00000022090
UniProt:
W5UB31
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All DBs
Position
11:complement(26790579..26843790)
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AA seq
475 aa
AA seq
DB search
MVCDTHHSRSSRSRRSSSSATMRGSVCFTAVFLGFTWHVSLSQATTATPNEAELNDNITV
FTRILDGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDER
LRFKGPMGMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGTLLYTMRLT
ISAECPMQLEDFPMDAHACPLKFGSYAYPISEVVYKWTQGPTKSVVVAEDGSRLNQYHLI
GQTAGTEDINTSRGLYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPA
RTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRS
WAWDGKKAMEAQQPKKKDPLALSKKPNNTCSTGMNFTANITKDSAIATISNSTTVQMKSA
ESKSTPDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAVSPT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtgacacacaccacagcagaagcagtagaagcaggagaagcagcagcagcgct
accatgagaggaagcgtgtgcttcaccgccgtcttcctcggcttcacatggcacgtcagc
ctctcgcaggccaccaccgcaaccccgaatgaagcagagttgaacgacaacatcacagtt
ttcactcggatcctggatggactgctggatggctacgacaacagactgcgtcccggcctg
ggagaaaaggtgactgagatcaagaccaacatctttgtcaccagtttcggtcccgtgtct
gatactgagatggagtacaccattgatgtgtttttccgccaaagctggaaggatgagcgc
ttgcgcttcaaagggcccatggggatgctgcccctgaacaacctgctggccagcaacatc
tggactcctgacaccttcttcctgaacggcaagaaatccatcgcgcacaacatgaccacg
ccgaacaagctgctgaggctgcaggatgacggcacgctgctctacaccatgagactgacg
atatcagcggagtgtccgatgcagctggaggatttccccatggacgctcacgcctgtcct
ctcaaattcgggagctatgcctacccgatctcagaggtggtgtacaagtggacccaaggt
ccaaccaagtctgtggtggtggcggaggacggctcacgactcaaccagtaccatctgatt
ggccagacagccggcactgaggacatcaacaccagcagaggcctctacacagtgatgatg
gctcacttctacctgaagagaaagatcggatacttcgtcatccagacctacatgccgtgc
ttcatgaccgtcattctgtcccaggtctccttctggctgaaccgggagtctgtccctgcg
aggacggtgtttggcgtgaccacagtgttaaccatgaccacactgagcatcagtgcccga
aactctctgcccaaagtggcctacgctacagccatggactggttcatcgccgtgtgctac
gccttcgtcttctccgccctcatcgagttcgctactgtcaactacttcaccaaacgcagc
tgggcctgggacggcaagaaagccatggaagctcaacagcccaaaaaaaaagacccgctg
gcgctgtccaagaagcccaacaacacgtgctccaccggcatgaacttcacagccaacatc
accaaagactcggccatcgccaccatctccaacagcaccaccgtgcagatgaagagcgcc
gagagcaagtccacgccagaccccaagaaaacctacaacagcgtcagcaagatcgacaag
atgtcccggatagtgttccccgtcctcttcggtaccttcaacctcgtctactgggccacg
tacctcaacagggaaccggtgattaaaggagcggtttcgcccacatag
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