Ictalurus punctatus (channel catfish): 108271527
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Entry
108271527 CDS
T04658
Name
(RefSeq) homeobox protein TGIF2
KO
K19553
homeobox protein TGIF2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108271527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271527
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108271527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108271527
NCBI-ProteinID:
XP_017334645
Ensembl:
ENSIPUG00000019999
UniProt:
A0A2D0RXG3
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All DBs
Position
11:complement(11501327..11511172)
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AA seq
400 aa
AA seq
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MKSVKRVFEEEHSGETEFSAMSDSDPCEDDSYPLNLSTGARGASAKRRRRGNLPKESVQI
LRSWLYEHRFNAYPSEQEKLSLSGQTNLSISQICNWFINARRRLLPDLLRKDGKDPTQFT
ISRRASKSDSRSVGSASPEHSTPPLVPASRPSVIRPAPTLDLSMLGNTATAILTGAGCLV
GSGLTGRDGGVQTLMQVDTRGLIKKESVNGPSNLTTIPGSSSSSSNLGTMSPTVVLFNTP
PPTPPELCPHDFSDLKLLVDAALQRAAEQENQRQKEQSSARVPSSVPVSASATEAPSRNT
EQEKRRESLSSGTKSDSAPSLQEKAVVPVSVPVLNASASSLPASKAGVSLPVVPHRVAGA
VNFQPNGVWSVVRPASPPPTSVTHTWSSQHTLHAVREAVN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtcaaaagagtgtttgaagaggagcacagtggagagacggagttttctgcc
atgtccgacagtgatccctgtgaggatgactcttacccactcaatctttccaccggtgcc
cgtggagcttctgccaagcgtcgccgccgggggaacctgcctaaagagtctgttcagatt
ctgaggagctggctatacgagcatcgttttaatgcctatccttccgagcaggagaagctt
agtttgtcaggacagactaatctctccatctcacagatctgtaactggtttattaatgca
cggcgacggctgctcccggacctgcttcggaaagacgggaaggacccgactcagttcacg
atctcccgccgcgccagcaaatcagacagccggtcagtgggctccgcctccccagaacac
tccaccccgccactggtccccgcatctcgcccctctgtcatccgccctgcccccacgttg
gacctgagcatgctgggtaatacagcgaccgccatcttgaccggggctggctgcttagtg
ggatcaggtttaacaggccgagatggtggtgtccagaccctcatgcaggtggatactcgc
ggcctgatcaagaaagaaagtgtgaatggaccttctaatctaactactattccaggctct
tcatccagcagctcaaacctgggaacgatgagtcctactgtggtgcttttcaacacgccg
ccccctacacccccagaactctgcccacatgacttcagtgacctcaagctgctcgtagat
gcagctctacagagagcagcagagcaggaaaaccagagacagaaggagcagtcttcagct
agagtacccagttctgttcctgtatctgcttcagcaacagaagctccaagtcgaaacaca
gagcaggaaaagaggcgtgaaagcctgagctccggcaccaaatctgactctgctccgagc
ctacaggagaaggccgtcgtccctgtctctgtgcccgtgttaaatgcctctgcttcttct
cttcctgccagtaaagcaggcgttagcctgccagtggtcccacatagagttgccggagca
gtaaattttcagccaaatggtgtgtggagtgtggtcagaccagctagcccacccccaacc
agtgtcacacacacctggagctcccagcatacactccacgctgtcagagaagcagtcaac
tga
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