Ictalurus punctatus (channel catfish): 108271531
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Entry
108271531 CDS
T04658
Name
(RefSeq) matrilin-4
KO
K19467
matrilin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108271531
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108271531
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Paralog
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GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
EGF
Matrilin_ccoil
hEGF
EGF_3
EGF_LRP2
DUF1194
Plasmod_Pvs28
Rhabdo_ncap_2
Motif
Other DBs
NCBI-GeneID:
108271531
NCBI-ProteinID:
XP_017334651
Ensembl:
ENSIPUG00000001441
UniProt:
A0A2D0RWU0
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All DBs
Position
11:1626046..1653249
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AA seq
621 aa
AA seq
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MKHLFVCVGTLLALVNIMEARPKAAEKEKCKSGPVDLVFIIDGSRSVRPHEFEMMRKFMI
DIINEMDISPNVTRVGVVQYSSQVQNVFSLKQLITHEEKIKAIKEIIPLAQGTMTGLAIR
YAMNVAFSAEEGARPNVPHVALIVTDGRPQDRVAEVAAAARESGIEIYAVGVARADLTSL
RAMASPPFEDHIFLVETFDLIHQFGLQFQDKLCKIDLCVESDHGCDHICESSSDSYQCLC
LPGYTLQDDGKTCKGIDLCVEEKHDCEQICISSPGSFNCDCNTGYALNEDKRTCTMIDYC
SFGNQSCDHECVSILKGYHCRCNEGYTLQADRKTCQADNLCNVVQHGCQHQCVSTPGSYR
CICPEGHLLQDNGKSCGSCRSANIDLVLLIDGSKSVRPENFELVKQFVNQVVDQLDISAH
GTRVGLVQYSSQVRTEFPLSMYKSKEEIKAAVMKVAYMEKGTMTGLALKHLVQDSFSEAE
GARAALRNIPRVGLVFTDGRSQDDITEWAKKAKEAGITMYAVGVGKAVEDELREIASEPL
EKHFFYTSDFTADFNQIAENLKLNVCPEESQGKIEVKDPCACDTLVEFQQATMVTLNQLN
KKLSAMTTRLEYLEKQLLKRK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttgtttgtttgtgttggtacactgctggctttagtgaacatcatggaagcg
aggccaaaagcagcagaaaaagaaaagtgtaagtctggcccggttgaccttgtcttcata
attgatggctcacgcagtgttcggccacacgaatttgagatgatgcgcaagtttatgatc
gacattatcaatgagatggacatcagccccaatgtcacccgtgtgggtgttgttcagtac
tctagtcaagtgcagaatgtcttttccctgaaacagttaattactcatgaggaaaagatc
aaagccatcaaagagatcattccattggcacagggtaccatgactggcctggctatccgt
tatgccatgaatgtggcattctctgctgaggagggggctcggcccaatgtgcctcatgta
gcgctgattgtcactgatgggcggcctcaggaccgtgttgctgaggtagctgcggctgct
cgagagtctgggatcgagatctatgctgtgggagtagccagagctgacctgacatccctg
agagcaatggcatcaccaccttttgaagaccatattttcctagtggagaccttcgatctc
attcaccagtttgggctccagttccaagacaagctttgcaaaattgatctttgcgttgag
tctgatcatgggtgtgatcatatctgtgagagttcttctgactcctatcagtgtctctgc
ttgccaggttacacactccaagatgatggcaagacctgtaaaggtattgatttgtgtgtg
gaggagaagcatgactgtgagcaaatctgtatcagttctcctgggtctttcaactgtgac
tgcaatacaggctatgcactcaatgaagataagaggacctgcacaatgattgactattgt
tcctttgggaatcaaagctgtgatcatgaatgtgtgagcatattaaagggataccattgc
cgctgtaacgagggatacacacttcaagcggatagaaagacctgccaggcggacaacctg
tgtaatgtagtacagcatggctgtcagcaccagtgtgtgagtacaccaggatcatatcgc
tgtatctgccctgagggtcatctcctccaagacaatggaaagagctgtggaagctgcaga
tcagccaacattgacctggttctcttgattgatggctctaagagtgtgcgaccagaaaac
tttgagcttgtcaagcagtttgtcaaccaggttgtggaccaactagatatatctgctcat
gggacacgtgtgggtcttgtacagtactccagccaggtgaggactgagttcccactaagt
atgtacaagagcaaggaagagatcaaggcagctgtgatgaaagtagcctacatggagaaa
ggaaccatgacagggctagcactaaagcacctggtgcaggatagcttctctgaggctgag
ggtgcccgtgctgccttaagaaacataccccgggttgggctggtgtttactgatggacgt
tctcaggatgacataacagagtgggccaagaaggccaaggaggcaggaattacaatgtat
gctgttggtgtgggcaaagctgtagaggacgagctgagagagattgcctctgagccactg
gagaaacatttcttctacacctctgacttcaccgctgacttcaaccagattgcagagaac
cttaaactcaatgtctgtccagaagagagtcagggtaaaatagaggtcaaggacccttgt
gcctgtgatactcttgtggagttccagcaggctactatggtcactctgaaccagctcaac
aagaaattgtcagcaatgactacacgattggagtatctggagaagcagctgctcaaaagg
aaatga
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