Ictalurus punctatus (channel catfish): 108271554
Help
Entry
108271554 CDS
T04658
Symbol
tnfrsf18
Name
(RefSeq) tumor necrosis factor receptor superfamily member 18 isoform X1
KO
K05154
tumor necrosis factor receptor superfamily member 18
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108271554 (tnfrsf18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108271554 (tnfrsf18)
04090 CD molecules [BR:
ipu04090
]
108271554 (tnfrsf18)
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108271554 (tnfrsf18)
CD molecules [BR:
ipu04090
]
Proteins
108271554 (tnfrsf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
VWC
PMP1_2
TMIE
Motif
Other DBs
NCBI-GeneID:
108271554
NCBI-ProteinID:
XP_017334685
Ensembl:
ENSIPUG00000000945
UniProt:
A0A2D0RXJ9
LinkDB
All DBs
Position
11:4439091..4445544
Genome browser
AA seq
223 aa
AA seq
DB search
MDKVKPYVILFATGCVLSMCMALDCNWKTQYEYKGRCCKTCPSGEFPKQHCSENSPSVCE
KCKGKSDHCFCNNALCENVDCSKCSTNPQCKQGEELKRTGSFKFGYNCGVCTNQTYYSEK
DKMCKPIKDCSEIGMLVIFRGNRTHNALCGYQVSYPNDLVTHIGVVMGLVITGLACLAIL
IYLCIQRTREPRTKKKYPPTSSSLNVPFEECGCKLSKEEIGEV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtgaaaccctatgtgattctgttcgccacaggctgtgtcttgtccatgtgc
atggctttagactgtaactggaagacacaatatgaatacaaggggagatgttgtaaaaca
tgcccttcaggtgaatttcccaaacaacactgcagtgaaaacagtccgagcgtatgtgag
aagtgcaaggggaaaagtgaccactgcttctgtaataatgctttgtgcgaaaatgttgac
tgttctaaatgttcaaccaatccacagtgcaaacagggagaagaactcaagagaacaggt
tcatttaaatttggatataattgtggagtgtgtacgaaccaaacatactacagtgagaag
gacaaaatgtgcaagcctataaaggactgcagcgaaattggcatgcttgtaatatttcgt
ggaaacaggactcacaatgcgttatgtggttaccaagtcagttaccctaatgacttggtg
actcatattggcgtagtgatgggtttagtcatcactggtttggcttgtctggcaattctt
atttacctctgcattcaaaggaccagagaaccgagaacaaagaaaaaataccctccaacc
tcaagttccctgaacgtgccctttgaggaatgtggctgcaagctgtccaaagaagaaata
ggagaagtgtaa
DBGET
integrated database retrieval system
