Ictalurus punctatus (channel catfish): 108271629
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Entry
108271629 CDS
T04658
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108271629
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108271629
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Contactins
108271629
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Others
108271629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_4
C2-set
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
108271629
NCBI-ProteinID:
XP_053539796
UniProt:
A0A9F7RCS5
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All DBs
Position
11:complement(2552795..2740925)
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AA seq
1008 aa
AA seq
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MKMRILLSWTALTLLSLKCNLAERIIQYGPVFTQEPSDSVFPLSTEDPKIFINCKAKGNP
LPHYRWKFNGKDFDTYTDLNYSLVEGNLLINNPQAMKDGGSYQCIATNAFGTILSRKAKV
EFAYLQNFTNKARNAVSVRECQAVVLLCGPPLHFGEVRYSWIFNGNPSVLIQDNRRFVSQ
RTGNLCIAKMEPSDVGNYTCVVKNLMTNSTVYSSPTPVVLRQDAVMGEYEPKIEVQFEEM
LHVVRGSSVRLECFALGNPVPSISWRRADRSPFPGKMKINQSNGVLEIPYFRPEDAGFYE
CVAENSRGHSIAKGQLIFDDVELLHWVQTLHDAYMAIDANLHWECRANWKPQPVYRWLKN
GQVMDRIRINGGKLMLLKVNLEDSGMYQCLAENEHSVVYASAELKVVAFPPDFSKSPVKK
STLVQKGGEDIIECRPHASPKASFSWRKEGDLLKNSERRTISEDGTLRITNVSESDAGRY
TCVAHNLFGVASSTGTLMVKEPTKITVPPLSMDATLGESIVLSCRVSRDSNMDLIFKWFF
NGKLVDFSRHEHFEMIGGGASGDIMVRNIQLKHSGKYVCMVHKAMDSVSAAADLIVRGPP
GCPERVLVGEVTERTVQLSWYPSPDNHSPITHYIVQAQSHFLIGWQAVKTVPHAVPGQMT
RAIAVGLSPWVQYKFRVAAMNSVGMGEPSAPSEAVLTKAAGKCVKLSMPVPEELQNGEEF
GYVVAFRLLDSLVWMQSLVPSVDESRYVFKNDTFPTLSHFEVKVGVYNSIGKGPYSPVSV
VYSAEEEPTIAPTKVWAHSLSFSELQVFWDPILPSHSKSTILGYEGSLQSEAMKERVIRS
PAYITGLKGSTLYLISVRAHNSGGVGPTSAVINMTTKKPPPSQSPGNIEWNLTNSKIFLH
WQHVKAMDNESEVTGYKVMYRQNWHRGTSTVEKNQTSLELQVPSEDLLIQIKTLSDGGDG
SYSSPIHIPKMTNLNSRGYFSSNANKLVHIHKVAFLMLVWLFLKNFSF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaggattttattatcatggacagccctaaccctgctgtcactcaaatgcaac
ctcgcagagagaattattcaatatggacctgttttcacccaagagcctagtgacagtgtc
tttccgctgagcactgaagaccccaagatattcatcaactgcaaagccaaaggaaatccg
ctgccccattacaggtggaaattcaacggaaaagatttcgacacttacactgatttgaac
tacagcctagtagagggcaacctcttgatcaataacccacaggcaatgaaagacggagga
tcttaccagtgtattgccactaatgcctttggaaccatcctgagccgcaaggccaaagtg
gagtttgcctatcttcagaatttcactaacaaggccagaaatgcagtctcagtaagagaa
tgccaggctgttgtgctgctgtgtggcccaccactccattttggagaggttagatattca
tggatcttcaatggtaatcccagtgtcctcatccaggataatcggcgctttgtgtcccag
aggacagggaacctgtgcatcgccaaaatggagccatctgatgtgggcaactatacgtgt
gtggtaaagaacttgatgaccaatagcaccgtgtacagctcgcccactcccgtggtgctg
cgccaggatgctgtgatgggtgaatacgagcctaaaattgaagtccagtttgaagaaatg
ctgcatgtcgtcagaggatcgtcggttagactggagtgctttgctctaggaaatccagtg
ccgtctatctcttggagaagagcagacagaagcccttttcctggaaagatgaaaatcaat
caatcaaatggcgtcctagagatcccttatttccggcctgaggatgctggcttttatgaa
tgtgtggcagagaactccagaggccacagtattgcaaaaggacaactcatatttgatgat
gtggaacttctgcattgggtccagacactgcatgatgcctacatggccatagatgccaat
ttgcactgggagtgcagggccaattggaaaccccagccggtgtacagatggcttaaaaat
ggacaggtcatggacagaatccgcattaatggaggcaagctcatgctcttgaaagttaac
ctagaggattcggggatgtatcagtgtttggccgagaatgagcatagtgtcgtttatgcc
agtgccgaactcaaagttgtagcttttcctccagacttttctaaaagtccagtgaagaag
tccacgttggttcaaaaaggaggtgaagacatcattgaatgtcggccacatgcatccccc
aaggcatccttctcatggaggaaagaaggtgatctgctgaaaaacagtgagagaaggaca
atctcagaggatggcactctgcgtattaccaatgtgagtgagtcagatgcaggtagatac
acatgtgtggcgcacaacctgttcggcgtggccagcagcacaggaacactgatggtcaaa
gaaccaaccaaaattacagttcctccactgagtatggatgccactttgggtgagagcatt
gttctgtcatgtagggtgtccagagactccaacatggacctcatcttcaagtggttcttc
aacggaaaacttgttgatttcagccgccatgaacactttgagatgattggagggggagca
tccggtgacatcatggtacgtaatattcagctaaaacactctgggaaatatgtgtgcatg
gtccataaagcgatggacagtgtctcggctgcagctgatttgatagtcagagggccccct
ggttgccctgagcgagttttggtgggggaagtcactgaacggacagttcagctctcatgg
tatcccagtcctgacaatcatagccccatcacacattatatagtgcaggcccaaagtcat
ttcttgattggctggcaggctgtaaaaacagttcctcatgctgtgcctgggcagatgaca
cgtgctattgcagtgggcttgagcccgtgggttcagtacaagtttagggtggcagccatg
aacagtgtcggcatgggtgagcctagtgccccatctgaggctgttctcactaaggcagca
gggaaatgtgttaaactgtcaatgcctgttccagaagaactacagaatggagaagaattt
ggatatgtggtagcctttcgtttacttgattctctggtctggatgcagagcttggtgccc
tcagtggatgaatcccgatatgtgtttaaaaatgacacctttcctacactctcacacttc
gaggtgaaggtgggagtgtacaacagcattggaaaaggaccctacagccctgtatctgtt
gtctactcagcagaggaagaacccactatagcccctactaaagtgtgggcacatagtctt
tccttctcagaactgcaggttttctgggatcccatcctgccaagccatagcaaatccaca
atcttaggatacgagggctcattacagagtgaggcaatgaaggaaagggtcataagaagc
ccagcttatatcacaggcctgaagggcagcacgctgtatctaatctcagtgagagctcac
aacagtggtggagttggacctaccagtgctgtcatcaacatgacaacaaagaaaccgcct
ccaagccagtctccagggaatattgagtggaacttgacaaactccaagatctttttgcat
tggcagcatgtaaaggcaatggacaatgaatctgaagtaacaggctacaaggtgatgtac
cgtcaaaactggcacagagggaccagcacagttgaaaaaaatcagacgtcattggagcta
caggttccatcagaagatcttcttatacagatcaaaaccttaagtgatggaggagatggc
agctacagcagtcctattcacataccaaagatgaccaatctgaactcaaggggctacttc
agctccaatgcaaacaagctggtccatatccacaaagtagcatttcttatgctagtatgg
ctatttctgaagaatttttccttttga
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