Ictalurus punctatus (channel catfish): 108271647
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Entry
108271647 CDS
T04658
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X4
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108271647 (dync1i2b)
09142 Cell motility
04814 Motor proteins
108271647 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108271647 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108271647 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108271647 (dync1i2b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108271647 (dync1i2b)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108271647 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108271647
NCBI-ProteinID:
XP_017334836
Ensembl:
ENSIPUG00000003917
UniProt:
A0A2D0RXC8
LinkDB
All DBs
Position
11:complement(24459002..24473051)
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AA seq
630 aa
AA seq
DB search
MSEKSELKAELERKKQRLAQIREEKKRKEEERKKKETEGRGEGASPPNDDSDLERKRRET
EALLQSMGITDPAMVPPPMSPSAKSVGTPSETGSQDSADGATGVRTLHWDSDPSTLLLHS
DSQHGRGPLRLGMAKVTQVDFPPRELVSYSKETQTPVTTQPKDAEEENEEEDLAVDSTAL
ESPKENEPHSEEEEAPPHELTEEEKQQILHSDDFQTFFDHSSRIMERALSEQVDVCFDYS
GRDLQDKEGETQAGTKLSLNRQFIDERWSKHRVVTCLDWSPQYPELLVASYSSNEEAPHE
PDGVALVWNMKYKKTTAEYVFHCQSAVMSAAFAQFHPNLVVGGTYSGQIVLWDNRSNKRT
PVQRTPLSASAHTHPVYCVSVVGTQNAHNLISISTDGKMCSWSLDMLSTPHDSLELVFKQ
SKPVAVTSMAFPLGDVNNFVVGSEDGTVYTACRHGSKAGISEMFEGHHGPVTGLDCHTAT
GPVDFSHLFVTSSFDWTVKLWSTRNTKPLYSFEDNSDYVYDVMWSPAHPALFACVDGVGH
LDLWNLNNETEVPSASVTIEGNPALNRVRWASSGREVAVGDSEGRVHIYDVGEQIAVPRQ
DEWTRFLKTLSELGENQEEAEDLATQRLAA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaaaagcgagctgaaggcagagctggagaggaagaaacagcgcctcgctcag
atcagggaagagaagaagagaaaagaggaggaacgcaagaaaaaagaaactgaagggcgt
ggagaaggcgcctctccgccaaacgatgactctgatctggagaggaagaggagggagacg
gaggctctgctgcagagcatgggcatcaccgatcctgccatggtcccccctcccatgtct
ccctctgccaaatcagtgggcactccgagtgaaaccggcagccaggactccgcagacggt
gccaccggagtcaggactctgcactgggattctgacccctctactctcctgctgcattca
gactctcagcatggacgaggtcctctcaggctcggcatggctaaagtgacccaggtggac
tttcctcctcgagagctcgtgtcgtactctaaagagactcagacacccgtcaccactcag
cctaaagacgcggaagaggaaaacgaggaggaggatctggcggtggattcgaccgctctc
gagtctccgaaagaaaacgaacctcactctgaggaagaggaagcgccacctcacgagctg
acggaggaggagaagcagcagatcctgcactcggatgacttccagacgtttttcgatcac
agctctcgcatcatggagcgcgctctctccgagcaggtggacgtctgcttcgactacagc
ggacgagacctccaggacaaagagggagagacccaggctgggaccaagctgtctctgaac
aggcagtttatagacgagcgctggtccaaacacagagtggtcacatgtctggactggtca
cctcagtacccggaattgttggtggcgtcctacagcagtaatgaagaagctcctcatgag
ccggacggtgtggcgctggtgtggaatatgaagtacaagaaaacaacagcggagtacgtc
ttccactgtcagtcggcggtgatgtcagcagctttcgcacagtttcatccgaacctggtc
gtgggtgggacgtactcgggacagatcgtcctgtgggacaatcgcagtaacaagcggaca
cccgtacagaggacacccctctctgcctccgcacacacgcacccggtgtactgtgtgagt
gtagtcgggactcagaacgctcacaacctcatcagcatctctactgacggcaaaatgtgc
tcctggagcctggacatgctctccacacctcatgacagtctggagctggtgtttaaacag
tctaaaccagttgcggtgacatccatggcgtttcctctgggtgatgttaataacttcgtg
gtgggcagtgaggacggcaccgtctataccgcatgcagacacggcagtaaagcagggatc
agcgagatgttcgaaggtcatcatggtccagttacggggctcgactgtcacacagccacc
ggacctgtcgatttctctcacctgtttgtgacatcatccttcgactggaccgtcaagctg
tggagcaccaggaacactaagccgctgtactcgttcgaggataactccgactacgtgtat
gacgtcatgtggtctcctgctcaccctgcgctgtttgcctgcgtcgatggagtcggacac
cttgacttgtggaatctcaacaacgagactgaggttccctcggcttcagtgacgatcgag
gggaacccggcgctaaaccgcgtgcgctgggccagttccggcagagaggttgccgtcggt
gattctgagggtcgtgtacacatctacgacgtaggagagcagatcgccgtgccgcggcag
gacgaatggacccgcttcctaaaaaccctcagcgaactcggcgagaaccaggaggaggcg
gaggatctggcaacccagcgccttgctgcctga
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