Ictalurus punctatus (channel catfish): 108271669
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Entry
108271669 CDS
T04658
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271669
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
Others
108271669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
GRAM
Laminin_G_3
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
108271669
NCBI-ProteinID:
XP_053539470
Ensembl:
ENSIPUG00000004464
UniProt:
A0A9F7RB04
LinkDB
All DBs
Position
11:complement(23961938..24034619)
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AA seq
2688 aa
AA seq
DB search
MASNERLYEVWMLYCNKRDPDYLKLWLEIFISSYDRSLDVDFEKQPIRVEEVPPVLSLLP
DNILQVLRVQLLQCVQKASVGLEQEQQHLALLLLKFLIITCRNLSNVEEIGTCSYINQII
TLTTLYIQQLKSKTKEKELADQTQAEEFVRHALAFCESLYDPYHNWRHRIQGQQISTVEK
SRQKFKAAPLTVEFVPFFYQCFQESEHLKDSLKCCLLHLFGSIVAGGQRNALLAISPATM
EVLLGVLGAGECIGEGEEGEDWDGAAPDRKAVLTLCCLREVVHSLLASSSDQRQVEISTV
LDSYFKLLNYDPNTAGVKGHPTSPRSHHWESRLVALQVNMLDTIQDMFECSDRPVLQAIF
LNSNCFEHLTRLLQNSKLVNVRFAAADKEQKDLTNRLLTGEIESQVFEGRLDSLTVATIK
TLTTVMHKSPAAKEVFKERIGYNHLYEVLVSLGQPSRNLLKELMNMAVEGDHSSVGFLGI
SNVEPLLLLIRWLPELDSAELQIFAADRLRRICALNRRTRAACVNARMPECVLSTLERDA
RLPRVCAESLLTLLGALGAESLSGAELQRLLSLLRNPENRLHPYTEPVLRSLLAMLRKHT
LHSATHYFDLTPPMAGIAVPTISRWPGSAFSFLSWLSLDQDQLEPAGKGEKRKQLYSFFT
PGGTGFEAFISSSGSLVVAVCSKKEYVTVTLPDYCFCDSLWHYIGVVHVPGKRPFGQSLV
YIYVDGQLKLSAPLKYPNMAEVFTSCCIGSAGQRTTTPPPSQIADPPPSRTSVWGGLSRL
ALISPGTQDSEWGRPTSLQGQLSTVMVFSDALNTNTIRALYNTGPNCISPFKSQEAELGD
LSTKLLLHYSPKACRNPICVDLSPNLLHGRLTGNKVVNWDVKDIINCIGGLPVLFPILEQ
LTFLTPEQHNGFSGSEGVTPEATTPTDGDWVILPTSRASEARLEKNLAATFLLVLKHFLH
RHTINQETLLHTHSVATLAALLQKLPAFLVDVSVLVAVQLLIEQVTYEKNPQLLQQLHTH
LLFNFNIWNQGDFPLRIGHIQYMSTVVKDNRKQFRKKYGVQFLLDTVRLYYSGNREGDMS
EDDVRTIRASLCGLLRYYISKGVSQDEIQSILGYIAAIGDEEQLCSILDLLLNLLQTSAS
RDQLFLLLFEPGAADSCYSLLLNHKYSDRLRELIFKLFERMLRCDHVYEKSKQRLRLREV
GYSGLTLLFPDLHITPTLVKCLLNQILHTDTVVNFKDLMALVQLTHRAELSVRMLICKRL
YSLVQSQADAALQLSRQPCWQDTLIRVLVRSCSGDSGSGRADSVSLGSVGSNRAELPVCV
ENLEENGEVLSLSETPSETSRSRGLSLDLSQVHALEPGDSGSQTPSPLDNAKPFPGSAPE
RETTSSLGDDSFLFSDNLSLGESFNSSERTEEELARMILEIVLCVMWKGVSGSDDAAWLE
RGQVFSALTKLGTANELLLPVDHIKLSLLERMLECAVSDNRDCVAAMLPEHTENAVRLLH
VVQDFLQAEGLVNPALWSERLLDDTVTLMDGLMVWYTAGTQWRQLSQLGLRLLLGFMAQP
DPQVCAMATAKLNGILQMKTVESQDEACFLLGRVECILQRSLGEQKETDGTRKDGSKEVD
RRRREEETYAFLVPLLRTLLSKVHKLLYMELHLPSLPNCNGSSSFFEDFQLYCSSPEWRV
YLDKYIIPYMKQYELETFSQGHENMALYWKDCYEAFMVNLHCRERERGESKIRFQDQFVE
PFSRRARQENLRYNSMLKQMHTQNSAVVRQWKAARRCLLGDRGPWAYRQQKEIHWKLSSA
ENYSRMRLKLVRNYNFDPHKEASALRDNLGVQHQKVNTESLLLEAVKQVKVSDLEDEILE
LPEEDPSGNTQADDEDAGQKEKLVMMEDCELVTVVDVFPGRLEITNQHIYFYDSSTEKEE
GVGQDFKWPLSQIREIHLRRYNLRRSALEIFLIDQTNYFLNFNKEVRNKVYNRMLLLCSL
SLHGTRSPQELLKASGLTQKWVNREISNFDYLMQLNTIAGRTYNNLAQYPVFPWILSDYT
SEELDLSDPRVFRDLSKPVAVLNEKNAKAVKEKYDSFEDPTGTIDRFHYGTHYSNAAGVM
HYLIRVEPFTSLHIQLQSNRFDCADRQFHSIPATWQTLMDNPNDVKELIPEFFYFPEFLV
NQNGFDLGRLQISKERVNDVILPKWAKSPEDFIYKHRKALESEYVSAHLHEWIDLIFGYK
QRGPAAVEALNVFYYCTYEGAVDLDAITDEKERKAVEGMISNFGQTPCQLLKEPHPVRLS
LEELEKRKSRLETSPLNIFEHLTDLKSFFVEGISDNTALVKAVVPKNQSHSFISQGSPDS
LVTVSYNYLIGTHGWLPYDKNISNYFTFIKDPTVANQKTQRFVAGPFSPDVEVSTKLFVV
SHDGKLLFSGGHWDNSLRVTSLLKGRTIAQHVRHMDVVTCLATDHCGLHLISGSRDNTCM
VWQVLQQGGAPVGLSPKPLQVLYGHTDEVASVCISSELDMAVSGARDGTVIIHTVRRGQY
LHSLRPPCESSLPVCVTHLAMSWEGHVVVHTCVEGKATLKDKNTLHLYSVNGKHLCSEPL
KEQVTDVCVSGEFIITGSEQGFLSIRDLYSLVLCVCPVAMRVPIRCVSVPKEQSHVLLGL
QDGKLIVVGVGKPAETRSGQITRKLWGSSKRMTQISSGETEYPTQEQI
NT seq
8067 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaacgagagactgtacgaggtctggatgttgtactgcaacaagagggaccct
gattatctgaagctatggttggagatcttcatcagctcgtatgatcgcagtctggatgtg
gactttgagaagcagccgatcagggtggaagaggtgcccccggtcctgtctctgctccct
gataacatcctgcaggttttacgtgttcagctgctgcagtgtgttcagaaagcttcagtg
ggactcgagcaggaacagcagcacctcgctctgctgctcctcaagttcctgatcatcacc
tgcaggaacctgtctaatgtggaggaaatcggcacctgctcctacatcaatcaaatcatc
accctgacgacgctctacatccagcagctgaagagtaagactaaagagaaagagctggcg
gatcagacgcaggctgaggagtttgtgcgacacgcgctggctttctgcgagagtctgtat
gatccataccacaactggagacaccgcatacaggggcagcagatcagcaccgtggagaag
agcagacagaagtttaaagcggctcctctaaccgtcgagtttgttccttttttttaccag
tgttttcaggagagtgagcatctgaaggacagtctgaagtgttgtctcctccacctcttt
ggatccatagttgccggtggacagcgtaacgctctcctggccatctcccctgccaccatg
gaggtgttgttgggtgtattgggtgctggcgagtgcataggggaaggtgaggagggggag
gattgggacggagccgccccagaccggaaggcggtgctcactctgtgctgtctgagggag
gtggtgcacagcctgctggccagcagctctgatcagagacaggtggagatcagcaccgtg
ctcgacagctacttcaaactgctcaactacgaccctaacacagccggggtcaaaggtcac
ccgacctcgccccgttcccaccactgggagagccggttggtggcgctgcaggtgaacatg
ctcgacacaatacaggacatgtttgagtgttctgaccggccggttcttcaggccatcttc
ctcaacagcaactgttttgagcaccttactcgcctcttacagaacagcaagctggtaaac
gttcggttcgccgcggcagacaaagaacagaaagatttaaccaacaggttactgacagga
gagattgaaagccaggtctttgaaggcaggctggactctctcaccgtggcaacgatcaaa
accctcaccacggtgatgcacaaatcgccagccgccaaggaagtgtttaaggagcggatc
ggctacaaccacctgtacgaggtgctcgtctctctgggacagccgtccaggaacctgctg
aaggagctcatgaacatggcggtggagggtgatcactcctccgtgggtttcctggggatc
agtaacgtggagccgctcctcctcctgatccgctggctgccggaactcgactcggccgag
ctgcagatcttcgcggccgatcggctccggaggatctgcgccttaaaccggcgcacgcgg
gccgcctgcgtcaacgcgcgcatgccggagtgtgttctctccacgctcgagagagacgcc
cgtctgccgcgtgtatgtgccgagagccttctgactcttctgggcgctctcggggcggag
tctctgagcggggccgagctccagcgccttctgagcctcctgcggaaccctgagaaccgc
cttcatccttacaccgagccggtgctgcgctcactgctcgccatgctccggaagcacacg
ctccacagcgcaacacactacttcgatctgaccccgcccatggcgggtatcgccgtgcct
accatttccaggtggccaggctccgccttcagcttcttgtcctggctgtcgttggaccag
gaccaattggaaccagccggcaagggtgagaagagaaagcagttatacagtttctttacg
cccggaggtacagggttcgaggccttcataagctcctctggctctctggtggtggcggtg
tgcagtaaaaaggaatacgtcacggtcacgctgcctgattactgcttctgtgactcactg
tggcattatattggcgtggtgcatgttcctgggaagagaccgttcggacagagtctcgtc
tacatctacgtggacgggcagctgaagttgtcagcaccgctgaagtaccccaacatggcc
gaggtgttcacgtcatgctgtatcggctcggcaggtcagcgcacgaccacccctcccccg
tctcagatcgccgacccccctccatctcgcacgtctgtgtggggggggctgtccaggctg
gctctgatctccccagggacgcaggacagcgagtggggacgacccacatcactgcaggga
caactgagcactgtgatggtgtttagtgatgctctgaacaccaacaccatcagagctctg
tacaacacagggccgaactgcatttctccctttaagagtcaggaggcggagctcggtgac
ctcagcaccaaactcctcctacactattcaccaaaggcctgtaggaaccctatctgtgtg
gacctgtcccctaatctactgcacggacgactgacggggaataaagtggtcaactgggac
gtcaaggacatcattaactgtatcggaggacttcctgtgttgttccccattctggagcag
ctgaccttcttgacccctgaacagcacaatggcttctcggggtcagagggcgtgacccct
gaggctaccacgcccactgatggagactgggtcatactgcctaccagcagagcctcagag
gcccgtttggagaaaaatcttgctgcgaccttcctgttagtgttgaagcacttcctgcac
agacacacaataaaccaggagacgctgctgcacacacacagtgtggccaccctcgctgcc
ctgctgcagaagctgcctgcttttctggtggacgtgagtgtgttggtcgccgtacagctg
ctgatcgagcaggtgacctatgagaagaatccccaactcctgcaacagctgcacacacac
ctgctgttcaacttcaacatctggaaccaaggagactttcccctgcgcatcggtcacatc
cagtacatgtccaccgtcgtcaaagacaacaggaagcagttcaggaaaaaatacggcgtg
cagttcctgctcgacacggtccgcctttactatagcgggaatcgcgagggcgatatgagc
gaggacgacgttcggaccatcagagcgtcgctttgtggccttctcaggtattacatcagc
aaaggcgtgagtcaggacgagatccagagcattctgggatacatcgctgctatcggagat
gaagagcagctatgtagtattttagacctgctgctgaatcttctccagacgagcgcgtca
cgcgatcagcttttcctgttgctgttcgagccgggagcggccgattcctgctactcgctg
ctgctcaatcacaaatactctgaccgcctccgagagctcattttcaagctgtttgagcgc
atgctgaggtgtgaccatgtgtatgagaagagtaagcagcggctgaggctgcgagaagta
ggctactctggcctcacactcctcttccctgaccttcacatcacccccacactcgtcaag
tgcctcctcaaccaaatcctccacacagacactgtagtgaactttaaggatctgatggct
ctcgtgcagttgactcatcgggctgaactgagcgtgcgcatgctcatctgcaagaggtta
tattccctggtgcagtctcaggcagacgcagcgctacagctgtcccgtcagccatgttgg
caggacacactgatccgagtgttggtgcggagctgcagcggtgactccggttcggggagg
gccgactcggtcagcctgggcagcgtcggctcgaaccgggcggaacttcctgtgtgtgta
gagaatctggaggagaacggagaagtgctgtctctttctgaaacccccagcgagacctca
cggagcagggggctgagtctggacctgagccaggttcatgcgcttgagccgggtgacagc
gggagtcagactccctcaccactggacaacgccaaacccttccctggtagcgcccccgaa
cgagaaaccacttcctctctgggagatgacagcttcctgttcagcgataatctctctctg
ggagagtcttttaacagttcagagcgcacggaggaggagttggcgcggatgattttggag
atcgtgctgtgtgtaatgtggaagggcgtgtctggctcggatgatgcagcatggctggag
aggggacaggtgttctccgctctcaccaaactgggcacagctaacgagctcctcctgccc
gtcgaccacatcaaactcagtctgttggagcggatgctggagtgcgctgtgagtgataac
cgggattgtgtggcagccatgttgccggagcacacggaaaacgcggtgcgactgctgcac
gtggtgcaggacttcctgcaggccgaggggctggtaaacccggcactgtggagcgagagg
ctgctggacgacacggtcacgctgatggacggcctcatggtgtggtacactgccggaaca
cagtggcgccagctctcacagctcggcctcaggctcttacttggatttatggcccagcct
gaccctcaggtgtgtgccatggcaacggcgaagctgaatgggatcctacagatgaaaacc
gtagagtctcaggacgaggcgtgtttcctgctcggccgggtcgagtgcatccttcagcgc
tctctgggcgaacagaaggaaacggacgggacacggaaggatggatcgaaagaggtggat
cggagaagaagggaagaggagacgtacgcgttcctggtccctctactccgaacgctcctg
tccaaagtgcacaagctgctgtacatggagctgcacctcccctcgcttccgaactgcaac
ggcagctcgtcgttctttgaggacttccagctgtactgcagctcacccgaatggagggtg
tacctcgacaaatacatcatcccgtacatgaagcagtacgagctcgagacgttcagtcag
ggacatgagaacatggctctgtattggaaggactgctacgaagccttcatggtgaaccta
cactgccgggagagggagcgaggcgagagcaagatccgatttcaggatcagttcgtggag
ccgtttagccggcgagctcgtcaggagaacctgaggtacaacagcatgctgaagcagatg
cacacgcagaacagcgccgtcgtcaggcagtggaaagcggcacggcggtgtctcctgggt
gatcgaggaccctgggcttacaggcagcaaaaggagattcactggaagttgtcgagtgca
gagaattactcccgtatgcgtctgaagttggtgaggaactacaacttcgaccctcacaaa
gaggctagcgctctgagagacaatctgggtgtgcaacatcagaaggtgaacactgagtct
ttgttgttggaggctgtgaagcaagtgaaggtcagcgacctcgaggacgaaatcctggag
ctgccggaggaggatccaagcgggaacacacaggcggacgatgaggacgcgggtcagaag
gagaagttggtgatgatggaggactgtgagctggtcactgtggtggatgtgtttcctggt
cggctggagatcacaaaccagcacatttacttctacgacagcagcactgagaaagaggag
ggtgtgggtcaggattttaaatggccgctgtctcagatcagagagattcacctgcgtagg
tacaatctccgccgctcagccctcgagatcttcctcattgatcagaccaactacttcctc
aacttcaacaaggaggtgcgtaataaagtctacaaccggatgctgctgctctgctctctc
tctctccatggcactcgctcgccccaggagctcctcaaggcctctggactcacccagaaa
tgggtgaacagggagatctcaaactttgactacctgatgcaactgaacaccatcgcaggc
agaacctacaacaacctggctcagtatcctgtgttcccctggattctgtcagattacacg
tcggaggagctggacctgtccgacccgcgagtgttccgtgacctctccaaacccgtcgct
gtgcttaacgagaaaaacgccaaagcagtaaaggaaaagtatgatagttttgaggacccc
actggtacaatagaccgcttccactacggcactcattattcaaacgctgcaggagtgatg
cactacctcatccgagtcgagcccttcacctccctgcacatccagctgcagagcaacagg
ttcgactgcgcagacagacagtttcactccatcccagccacatggcagacgctcatggac
aaccccaacgatgtcaaagagctcatcccggagttcttctacttcccagagttccttgtg
aatcagaacggctttgacctgggtcgtctgcagatctctaaggagcgtgtgaacgatgtc
attttgccgaaatgggccaaatctcccgaggacttcatttacaagcatcgcaaagccctg
gaatcagagtatgtctccgcccacctccacgagtggatcgatctgatattcgggtacaag
cagagaggcccggctgcagtcgaggccctcaacgtcttctactactgcacgtatgaaggc
gctgtagatctggacgccatcacggatgagaaggagaggaaagctgtagaaggaatgatc
agcaacttcggacagacgccatgccagctgttaaaggagcctcatcctgtccgtctctct
ctggaggaactggagaagaggaaatcccgactcgagacgagtccgcttaacatcttcgaa
catctcaccgacctcaagtcattcttcgtggaggggatcagtgataacaccgccctggtg
aaagcagtggtcccgaagaaccagtctcactcgttcatctctcagggcagcccggactcg
ctggtgaccgtgagttacaactacctgataggaactcacggctggctcccttacgataaa
aacatctccaactacttcaccttcatcaaagaccccacggtggccaatcagaagacccag
cggttcgtggcggggccgttctctccagatgtggaggtctctaccaagctgtttgtggtg
tctcatgatgggaagcttctgttcagcggaggccactgggacaacagtctgcgggtcaca
tcgctgctgaaggggaggacgatagcgcagcacgtccgccacatggatgtggtaacctgc
ttggcgacagatcactgtgggcttcacctgatctctggttccagagacaacacctgcatg
gtgtggcaggtgctgcagcagggcggggctccagtgggtctgagccctaaaccattgcag
gtgctgtacggacacacagacgaggtagcgagtgtgtgtatcagctcagagttggacatg
gccgtctcaggagcacgggacggcacagtgattatccacacagtgaggagaggacagtac
ctgcactcgctgcgtcccccgtgtgagagctctctacctgtgtgtgtcacacacctggcc
atgtcctgggagggtcacgtggtcgtacacacctgtgtagagggcaaggccacgctgaag
gataagaacacgctgcacctgtactcagtgaacgggaaacacctgtgcagcgagcctctg
aaggagcaggtgacggatgtgtgtgtgtcgggagagttcatcatcaccggcagtgaacag
ggctttctctccatcagagacctgtacagcctggtgctgtgtgtgtgtcctgtggcgatg
cgtgtgccgatccggtgtgtgtcggtgccgaaggagcagtctcacgtgttgctggggctg
caggacggaaaattgatcgtggtgggagtgggaaaaccagccgagacgcgttcgggtcag
atcacgcggaagctttggggctccagcaaacgcatgacccagatttcatccggcgagacc
gaatatcccacccaggagcagatttga
DBGET
integrated database retrieval system
