Ictalurus punctatus (channel catfish): 108271685
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Entry
108271685 CDS
T04658
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108271685
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108271685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108271685
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Transforming growth factors (RSTK binding)
108271685
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GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
108271685
NCBI-ProteinID:
XP_017334886
UniProt:
A0A2D0RXH4
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Position
11:complement(1460697..1469779)
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AA seq
436 aa
AA seq
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MNVLALFFGCCALLCVHSVSQALGLEPKPRLTSSAAKSGTKVSRIRAAAPPIPVEAMPPQ
SAAHAPSGLTARTSVAKAILAAHQRASAKRSVKVKGKVVEKERPRQPVVTPHDYMLSLYW
SLSTGQINRSAMHEAGMANTITSFVDKGQDEHVPLLKRQRYYFNISSLEKEGLLGAELRI
LRKPFTDPIRNPATEGRNCLRLYTCATSKQRAMLLQSQPIQDHSIPKWEVFDIWKLFKSF
RNTVQLCFELEAIDQGHPLDLRSLGLDRSGRQNKEKAFFVVFSRTKKHGLFYNEIKARSG
HDKKTVYDYLFTQRRMRRAPLPRVKKLSRSPKTRCNRKELHVNFKEMGWDDWIIAPLEYE
AFHCDGICDFPIRSHLEPTNHAIIQTLMNSMDSHSTPPTCCVPTRLSPISILYIDSANNV
VYKQYEDMVVESCGCR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttctcgctctgttcttcggctgctgtgcgctattgtgcgtgcactcggtatcg
caagcccttggtctcgaacccaaaccgaggctaacgtcttctgcagcgaagagcggcacc
aaggtctcgcgcattcgcgctgcggcgccgccgattccggtcgaagcgatgcccccgcaa
agcgcagcgcacgcgccctcaggactcaccgcacgcaccagcgtagcaaaggccatcctc
gcggcgcatcaaagagcgtcggcaaaaaggagcgtgaaggtgaaaggtaaagtggtggag
aaagagagaccgagacaaccggttgtcacaccgcatgattacatgctgtctctttactgg
tctctgtccactgggcagataaaccgaagcgcaatgcacgaggcgggcatggctaatacc
atcacgagcttcgtggacaaaggacaagatgagcatgtgcccttgttaaagcgccagagg
tattactttaacatcagttccctggagaaggagggactgctgggagctgaattacgtatt
ctccgaaagcccttcactgatcctattagaaaccctgccactgagggcagaaactgtctt
cgactttacacatgtgccacaagtaagcagagggctatgttgctccagtcgcagcccata
caggatcatagcatcccaaaatgggaggtgtttgacatttggaaactgttcaagagtttc
agaaacactgttcagctttgttttgagttggaggcaatagatcagggccacccattggac
ctcaggtcacttggcctggatcgttcaggacggcaaaacaaggagaaggccttctttgtg
gtgttcagccgcacaaagaagcatggtctcttttacaatgagatcaaggcacgctcaggc
catgacaaaaaaactgtctatgattacctgtttacgcagcgcagaatgcgccgggcacca
ctgccacgtgtcaagaaactgagcagaagtccaaagacacggtgcaaccgcaaggagctt
catgttaactttaaggagatgggctgggatgactggatcattgcaccattggagtatgag
gcctttcactgtgatggaatctgtgattttcccatccgctcacatctggagcccaccaat
catgccatcatccagacactcatgaactctatggattctcactcgacacctcccacctgc
tgtgtacccacgagacttagtcctatcagtatcctctacattgactcagctaataatgtt
gtgtacaagcaatatgaggacatggtggtagagagttgtggctgtagatag
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