Ictalurus punctatus (channel catfish): 108271693
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Entry
108271693 CDS
T04658
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271693
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108271693
Endosome - Golgi transport
Rab GTPases and associated proteins
108271693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_6
EF_EFCAB10_C
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
108271693
NCBI-ProteinID:
XP_017334894
Ensembl:
ENSIPUG00000002183
UniProt:
A0A2D0RWL7
LinkDB
All DBs
Position
6:10083004..10114213
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AA seq
1059 aa
AA seq
DB search
MWLNPTEVSLKNALNLWITDRSNDYFLLQRRRGHGDTGGKFTGMLVGALDTVLDSNARVA
PFRILLQVPGSQSGWVIASGATAEEVQKHWKWLDQNLLPYMSVFENKQDAASFVQGKVKG
LIAEEVLVGQAALEDDPTRFREAMMRFEQRFGLPLKEKLVAHYSCCCWKGRVPRQGWIYL
STNHLAFYSFLLGKEVKLLIPWAEVTALERATFGLINDAIRVRTRQKQREFSMFLDVDEV
MTVMTQLGDMALRRLFDNGKMEPDSNITKRALEQQAMRQYVLSLFGLPRSETLKEVMRCA
AWTPHARCHTAGNLYVTENYMAFSSLQEGHCTLLIPLAEVQSVEKAESTGALPNPVIISM
RSKRAFQLIEVKRRDQLVDNLNTCLQVLHWHSDRKRTLISSTPYYTFCYDTDDTLHPIIL
EEALITTFQTSQSESSERRRLWDEHFEEFGRGVHMFHTEKTQKLVAAGIPESLRGEMWLT
FSDARSSMNTHSRSYSDLLEERTNEQTSDEIERDLRRSLPEHAAFQSETGIAALRRVLNA
YAFRNPGIGYCQSMNILASVLLLYTREEEAFWLLVTVCERMLPDYFNRRVIGAQVDRSVF
EELIRERLPHLAERVPDLTALSSLSLSWFLALFLSTVPFRTGLRILDCFFCHGVKIIFQL
GLAVLDANVNEICASTDDGQSLMILTSFLEHVRDDEGSCVSSEEMGPAGHTPISALINDA
YEKFGDLTVKQLERMRSRHRIQVLQAHEDTSKENTLRLVLPGVSLSQEDLSELYDLFKTE
HFINLYWGDGVCSASPEQYQVDRAQFKSLYQLLMPWQCGSHMDTMAQRTFNLLDQDGQNH
ITFSQFTCWIDTLYCEELNEKVRLLYRLHIPPALTENEGNPSPMKAPILSTTRPLCVNLP
NGEGKSYEEQLKQMLKDLGKEKDKGLEKPLPHMKQREFVQFCKTLCSMFHGVPGENELFQ
AIAVVTSLVLQIGEARNKGAKPKESDQTTMVSASARESMLEAEIDWTVSFEQILASLLTE
QVLVNFLETPVDLSGKIASAKEKQYQQRSGLLMVQHSFS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaatccgaccgaggtgtcgctgaaaaatgcgctgaatctctggatcacggac
agatctaacgattatttcctcctgcagcgaagaaggggacatggagacaccggggggaaa
ttcacaggtatgttggtgggagcactggacaccgtgttggactcaaatgcacgagtcgct
ccatttaggatccttctacaagttccgggttcacagagcggctgggtcattgctagtgga
gccacagctgaagaagtgcagaaacactggaaatggttggaccagaacttgttgccgtac
atgtcggtatttgagaacaaacaggatgctgcaagctttgtgcagggcaaagtcaagggc
ctgattgccgaggaagtgctcgttggccaggcggcgctggaagatgacccaacccgtttc
cgtgaggcgatgatgcgattcgagcagcgatttggcctcccgctgaaagaaaaattggtt
gctcattactcctgctgctgctggaaaggcagagtgcctcgtcagggctggatctacctc
tccaccaatcacctggctttctactcgttcttgcttggaaaagaggtgaagctgttgatc
ccgtgggcagaagtcacggctctggagcgtgcgacctttggtctcatcaacgacgcgatc
cgagtccgaacgcgccaaaagcagcgtgaattctccatgtttcttgatgtggatgaagtg
atgaccgtcatgactcagctgggcgatatggcactgcgaagactgtttgataatggcaaa
atggaaccggactccaatattactaaacgggcactggagcagcaggccatgcgccagtac
gttctgtcactcttcggcctcccgcgttctgagacgctaaaagaagtgatgcgatgtgca
gcttggacgcctcacgcccgatgtcacacggctgggaatctctatgttacggaaaattac
atggccttcagcagccttcaggaggggcactgcaccctcctcatcccgctagccgaggtg
cagtctgtggagaaagcagaaagcactggtgctctgccaaaccctgtgatcatcagcatg
cgttcgaagcgggctttccagctaatcgaagtgaagcgacgagaccagttggtggacaat
ctgaacacctgtctccaagtgttgcactggcacagcgaccgcaaaaggactctgatttcc
tccaccccttattacacattttgctatgacacggacgacacgctccatcccattattctc
gaggaagcgttaatcacaacattccagaccagccaatcggaatcttccgaacgcaggcgc
ctgtgggacgagcactttgaagagttcggacgcggtgttcacatgttccacactgaaaaa
acacaaaaactggtggctgcgggcatcccagagtctctgcgtggagagatgtggctcacc
ttttcagatgcacggtcctctatgaacacccactcacgttcttactctgatttgctggag
gagaggacaaacgagcagacgagtgacgagatcgagagagacctgcggcgttcgttgcct
gaacatgctgcgtttcagagcgagacaggcatcgcagcgctgcgtcgcgtactcaacgcc
tacgccttccgcaacccaggcatcgggtactgccagtctatgaacatcttagcatcagtg
ttgctgctctacacgagagaggaagaagcattctggctgctggtcacagtgtgtgagaga
atgctgcctgattatttcaaccgcagagtcattggtgctcaggtggaccgttctgtgttt
gaggagctgatccgtgagcgattgccccacctggccgagcgcgttccagaccttaccgct
ctttcatcgctctcgctctcctggtttcttgctctattcctcagcactgttccattccgt
accggcctgcgcatcctcgactgcttcttctgccatggcgtcaaaatcattttccagctg
ggccttgctgtgctcgatgctaatgtcaatgaaatttgtgctagcactgacgatggtcag
tctctgatgatactgaccagtttcctggagcatgtccgagacgacgaggggtcgtgtgtg
agttccgaggagatggggcctgcaggacacacaccaatcagtgctctcatcaatgatgca
tatgagaaatttggggacttgacggtaaagcagctggaaaggatgagatcaagacacaga
atccaagttctgcaggcccatgaggacacctctaaagagaacacactgcggcttgtcttg
cctggtgtctctctctctcaggaggatctgtcagaactctacgacctctttaagacagaa
catttcattaacctgtactggggagacggagtgtgttctgcttctcctgaacaataccaa
gtggaccgagcccagtttaagagcctctaccagctgttgatgccttggcagtgtggatca
cacatggatacaatggcacagagaaccttcaacctgctggaccaagatggacaaaaccat
atcacattcagccagttcacctgctggattgacaccctgtactgtgaagagctgaatgag
aaagtcaggcttctctaccgtcttcacattccacctgccctgactgagaacgaaggcaat
ccttctcctatgaaggctcccattctttccaccaccagacctctctgcgtcaacctgccc
aatggagaggggaaaagctatgaagagcagctgaagcagatgttgaaggatttgggcaaa
gagaaagacaaaggtctggagaagcccctccctcatatgaaacaacgagagtttgtccag
ttttgcaagacgctgtgcagcatgttccatggcgtccccggtgaaaatgaactcttccaa
gccattgctgtggtcaccagtttagtactgcagattggtgaggcccggaacaagggagcc
aaaccaaaggaatcggaccaaacaaccatggtttctgcttctgcgagagaaagcatgttg
gaggcagaaattgattggacggtgagttttgagcagattttggcctcactgctgaccgag
caggtacttgtaaatttcctggagacaccagtggatctcagtgggaagattgcatcggca
aaggagaagcagtatcagcagcgttcaggactgctgatggtccagcacagcttcagctaa
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