KEGG   Ictalurus punctatus (channel catfish): 108271694
Entry
108271694         CDS       T04658                                 
Name
(RefSeq) integrator complex subunit 6
  KO
K13143  integrator complex subunit 6
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108271694
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    108271694
SSDB
Motif
Pfam: Beta-barrel_INTS6 INT_SG_DDX_CT_C VWA_2
Other DBs
NCBI-GeneID: 108271694
NCBI-ProteinID: XP_017334897
Ensembl: ENSIPUG00000002221
UniProt: A0A2D0RWM0
LinkDB
Position
6:10018107..10031509
AA seq 856 aa
MPVILFLIDTSASMNQRSRLGTTYLDIAKGAVETFLKLRSRDPASRGDRYMLVSFEEAPA
GIKAGWKESHAIFMTELRNLQAVGLTTFGQSLRTSFDLLNLNRLISGIDNYGQGRNPFFL
EPAIIVAITDGSKLTSTSGVQDELHLPLMTPLPGSELTKEPFRWDQRLFSLVLRISGHAP
LEPEPMGGVPADPSPVTPMCEVTGGRSYSVFSQRMLNQCLESLVQKIQSGVVINFEKTGP
DPAEDGPSEAKSGPQQWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRMAH
PQVRFSCLEAEPMVVDKVPFDKYELEPSPLTQYILERKSPHTCWQVYVGNSAKYGELGQP
FGYLKASTALSCVNLFIMPYNYPVVLPLLDDLIRVHKFKPTPKWRQAFESYLKTMPPYYI
TPLRKALRMMGAPTLLAESMEYGLSYSVASYLKKLSQQAKVEADRVCAFVGKKAGPDVGI
KLRLRGSALSLAHRKDFAQLLQSIMGDGPLDINPKEFSGFQLAVLNKALKPQSLRNPYDI
PRIQLLDQLSRMRRNLLNTSMCVLKGQDQDQLHSVPIAQMGNYQDFLKLVPAPLREVDPD
QPRRLHTFGNPFKLDKKAMMVDEADEFVTGTQGKGKRPIDTSTPTGAPKRRRCMSPLLRL
GRAYTPPNKTPPRALDANHVSHLELEQAPVLNHMGHLDLEQVPDSNHIGHVELERAPDSN
HMGCLDLERTQELPSLPPSNLHGNHLAEEEEAKRENGGDDPEEEELKRRRIEEGRELNTE
LRVLITREIRKPGRRYERIFYLLKQIKGSLETRLIFLQNIIKEAARFKKRVLIEQLENFL
EEIHLRANSMNHLDDF
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgcctgtgatcctgtttctgatagacacgtccgcctctatgaaccagcgctcccgtttg
ggcactacctatctggacatagctaagggtgctgttgagactttcctcaagctcaggagt
agggatccggcgagcagaggagaccgatacatgctagtttctttcgaggaggctcctgcc
gggataaaggctggatggaaagagagccacgccatcttcatgacggaactgaggaacctg
caagctgttggtttaaccacattcggccagtctttaaggacctctttcgatttgcttaac
ctaaaccgtttaatttccgggatagacaactacgggcagggaagaaacccatttttcctg
gagcctgccatcatagtcgccattacagatggaagcaaactgaccagcacttcaggagtg
caggacgagttgcatttacccttgatgaccccattgccgggcagcgagttgacgaaggag
ccattccgctgggaccagcgccttttttctttggtgctccgcatttcaggccatgcccct
ctggagcctgagccaatgggcggtgtcccggccgacccctcccccgtcacgcccatgtgt
gaggtgacaggaggccgctcgtacagtgtgttttctcagcgtatgctgaaccagtgcctg
gagtctctggtgcagaaaatccagagcggagtcgtgataaactttgagaagacgggaccc
gaccctgctgaagatggtccttcagaagccaaatctggcccccagcagtggcacagctgc
cataagctcatttatgtgcggcctaatcctaaaacgggggttcctgttggccactggccc
attcctgagtccttctggcctgatcagaactcccccactctgccaccacgaatggcccat
ccacaggtgcgtttttcctgcttggaggcagagcctatggtcgtagataaggtccctttc
gataagtatgagctggagccgtctcctttaacacagtacattctggagaggaagtcacca
cacacctgctggcaggtttacgtaggtaacagcgctaagtatggcgaactcgggcagccg
ttcggctacttgaaggcgagtacagctctcagctgtgtcaacctcttcatcatgccctac
aactaccctgtggtgctgcccctactcgatgacttgattcgagtgcacaaattcaagcct
actccaaaatggcgtcaggccttcgagagctacctgaagaccatgccaccatactacatc
acgcccctgaggaaggcgctgaggatgatgggagcaccgactctgctggctgaaagcatg
gagtacggcctgagctacagtgttgcttcatacttgaagaaactcagccagcaggcgaag
gtggaggcagaccgtgtttgtgcatttgttggtaagaaggcggggcctgatgtgggtatc
aagctccgcctccgaggctccgctctctcgttagctcacagaaaggactttgcacagctg
ctgcaaagcatcatgggagatggcccgcttgacattaaccccaaagagttctcagggttc
cagctggctgtgctgaacaaggccctgaagccacagagtctgcggaacccatatgacata
cccaggattcagctgctggaccagctgagtcgcatgaggagaaatcttctgaacaccagc
atgtgtgtgctgaagggccaagaccaagatcagctccacagcgtgcccatagcacaaatg
ggcaactatcaggacttcctgaaacttgtccccgcccccttgagagaggtggacccggac
cagccgaggcgactgcacacctttggcaaccccttcaaactggacaagaaggcgatgatg
gtggatgaagcagacgagtttgtgactgggactcaggggaaaggcaagcgacccatcgat
accagcacacctactggtgctccaaaacggaggaggtgcatgtcgcctttactgcgcctg
ggacgtgcatacaccccgcccaataagacaccacccagagctctggatgctaatcatgtg
agccacctcgaattggagcaagccccagtgctcaaccacatgggccatctcgatttggaa
caggtccctgattccaaccacataggccatgtcgaattggagcgtgccccagactccaat
cacatgggctgtctcgatttggaacggacccaggaactgccatccttgcccccctctaac
ctccacggaaatcacctggcggaggaagaggaggccaagcgggagaacggtggagacgat
ccagaggaagaggagctgaagaggaggaggattgaggaagggcgcgagctgaacacagaa
ctccgcgtcctcatcaccagggagatcaggaagccaggccgacgttatgagagaatcttc
tacctcctgaagcagatcaagggcagtctggaaacgagactcatctttctacagaacatc
attaaagaggcagcgagatttaaaaagcgagtgctcatagagcagctagagaacttcctg
gaagagatccatttacgtgcaaacagcatgaaccatctggacgacttctaa

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