Ictalurus punctatus (channel catfish): 108271694
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Entry
108271694 CDS
T04658
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108271694
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108271694
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
108271694
NCBI-ProteinID:
XP_017334897
Ensembl:
ENSIPUG00000002221
UniProt:
A0A2D0RWM0
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Position
6:10018107..10031509
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AA seq
856 aa
AA seq
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MPVILFLIDTSASMNQRSRLGTTYLDIAKGAVETFLKLRSRDPASRGDRYMLVSFEEAPA
GIKAGWKESHAIFMTELRNLQAVGLTTFGQSLRTSFDLLNLNRLISGIDNYGQGRNPFFL
EPAIIVAITDGSKLTSTSGVQDELHLPLMTPLPGSELTKEPFRWDQRLFSLVLRISGHAP
LEPEPMGGVPADPSPVTPMCEVTGGRSYSVFSQRMLNQCLESLVQKIQSGVVINFEKTGP
DPAEDGPSEAKSGPQQWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRMAH
PQVRFSCLEAEPMVVDKVPFDKYELEPSPLTQYILERKSPHTCWQVYVGNSAKYGELGQP
FGYLKASTALSCVNLFIMPYNYPVVLPLLDDLIRVHKFKPTPKWRQAFESYLKTMPPYYI
TPLRKALRMMGAPTLLAESMEYGLSYSVASYLKKLSQQAKVEADRVCAFVGKKAGPDVGI
KLRLRGSALSLAHRKDFAQLLQSIMGDGPLDINPKEFSGFQLAVLNKALKPQSLRNPYDI
PRIQLLDQLSRMRRNLLNTSMCVLKGQDQDQLHSVPIAQMGNYQDFLKLVPAPLREVDPD
QPRRLHTFGNPFKLDKKAMMVDEADEFVTGTQGKGKRPIDTSTPTGAPKRRRCMSPLLRL
GRAYTPPNKTPPRALDANHVSHLELEQAPVLNHMGHLDLEQVPDSNHIGHVELERAPDSN
HMGCLDLERTQELPSLPPSNLHGNHLAEEEEAKRENGGDDPEEEELKRRRIEEGRELNTE
LRVLITREIRKPGRRYERIFYLLKQIKGSLETRLIFLQNIIKEAARFKKRVLIEQLENFL
EEIHLRANSMNHLDDF
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgatcctgtttctgatagacacgtccgcctctatgaaccagcgctcccgtttg
ggcactacctatctggacatagctaagggtgctgttgagactttcctcaagctcaggagt
agggatccggcgagcagaggagaccgatacatgctagtttctttcgaggaggctcctgcc
gggataaaggctggatggaaagagagccacgccatcttcatgacggaactgaggaacctg
caagctgttggtttaaccacattcggccagtctttaaggacctctttcgatttgcttaac
ctaaaccgtttaatttccgggatagacaactacgggcagggaagaaacccatttttcctg
gagcctgccatcatagtcgccattacagatggaagcaaactgaccagcacttcaggagtg
caggacgagttgcatttacccttgatgaccccattgccgggcagcgagttgacgaaggag
ccattccgctgggaccagcgccttttttctttggtgctccgcatttcaggccatgcccct
ctggagcctgagccaatgggcggtgtcccggccgacccctcccccgtcacgcccatgtgt
gaggtgacaggaggccgctcgtacagtgtgttttctcagcgtatgctgaaccagtgcctg
gagtctctggtgcagaaaatccagagcggagtcgtgataaactttgagaagacgggaccc
gaccctgctgaagatggtccttcagaagccaaatctggcccccagcagtggcacagctgc
cataagctcatttatgtgcggcctaatcctaaaacgggggttcctgttggccactggccc
attcctgagtccttctggcctgatcagaactcccccactctgccaccacgaatggcccat
ccacaggtgcgtttttcctgcttggaggcagagcctatggtcgtagataaggtccctttc
gataagtatgagctggagccgtctcctttaacacagtacattctggagaggaagtcacca
cacacctgctggcaggtttacgtaggtaacagcgctaagtatggcgaactcgggcagccg
ttcggctacttgaaggcgagtacagctctcagctgtgtcaacctcttcatcatgccctac
aactaccctgtggtgctgcccctactcgatgacttgattcgagtgcacaaattcaagcct
actccaaaatggcgtcaggccttcgagagctacctgaagaccatgccaccatactacatc
acgcccctgaggaaggcgctgaggatgatgggagcaccgactctgctggctgaaagcatg
gagtacggcctgagctacagtgttgcttcatacttgaagaaactcagccagcaggcgaag
gtggaggcagaccgtgtttgtgcatttgttggtaagaaggcggggcctgatgtgggtatc
aagctccgcctccgaggctccgctctctcgttagctcacagaaaggactttgcacagctg
ctgcaaagcatcatgggagatggcccgcttgacattaaccccaaagagttctcagggttc
cagctggctgtgctgaacaaggccctgaagccacagagtctgcggaacccatatgacata
cccaggattcagctgctggaccagctgagtcgcatgaggagaaatcttctgaacaccagc
atgtgtgtgctgaagggccaagaccaagatcagctccacagcgtgcccatagcacaaatg
ggcaactatcaggacttcctgaaacttgtccccgcccccttgagagaggtggacccggac
cagccgaggcgactgcacacctttggcaaccccttcaaactggacaagaaggcgatgatg
gtggatgaagcagacgagtttgtgactgggactcaggggaaaggcaagcgacccatcgat
accagcacacctactggtgctccaaaacggaggaggtgcatgtcgcctttactgcgcctg
ggacgtgcatacaccccgcccaataagacaccacccagagctctggatgctaatcatgtg
agccacctcgaattggagcaagccccagtgctcaaccacatgggccatctcgatttggaa
caggtccctgattccaaccacataggccatgtcgaattggagcgtgccccagactccaat
cacatgggctgtctcgatttggaacggacccaggaactgccatccttgcccccctctaac
ctccacggaaatcacctggcggaggaagaggaggccaagcgggagaacggtggagacgat
ccagaggaagaggagctgaagaggaggaggattgaggaagggcgcgagctgaacacagaa
ctccgcgtcctcatcaccagggagatcaggaagccaggccgacgttatgagagaatcttc
tacctcctgaagcagatcaagggcagtctggaaacgagactcatctttctacagaacatc
attaaagaggcagcgagatttaaaaagcgagtgctcatagagcagctagagaacttcctg
gaagagatccatttacgtgcaaacagcatgaaccatctggacgacttctaa
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