Ictalurus punctatus (channel catfish): 108271809
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Entry
108271809 CDS
T04658
Name
(RefSeq) von Hippel-Lindau disease tumor suppressor
KO
K03871
von Hippel-Lindau disease tumor supressor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108271809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108271809
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108271809
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHL
VHL_C
Motif
Other DBs
NCBI-GeneID:
108271809
NCBI-ProteinID:
XP_017335079
Ensembl:
ENSIPUG00000022798
UniProt:
A0A2D0RX52
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All DBs
Position
11:complement(25203395..25209078)
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AA seq
172 aa
AA seq
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MPQPPEAGERQQQLPLVRSLNSRLPAHVLFCNRSPRTVRLLWINFQGQPESYGELKPQTG
RRMNTFVGHPWMFRDAETDDPMFVNNKEMYLPNALENGQVSVVNITLPVFSLRERCLQVV
RKLVRIEDFSRLEIARSLQEDLSQKPSIHSDLQRINQRVEQRLLQNREEQNT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccaccggaggccggggagcggcagcagcagctccctctggtccgctcgctg
aacagtcggctcccggctcatgtgctgttctgtaaccgcagtccccgcaccgtcaggctg
ctgtggattaatttccagggacagccggagtcttacggcgagctgaagccgcagaccggg
aggaggatgaacacttttgtggggcacccgtggatgtttcgtgatgctgagactgatgac
ccaatgtttgtgaataataaagagatgtacttgcccaatgcgctggaaaatggccaagta
tctgtggtcaacatcacactaccagtgttttccctgagggagcggtgtctgcaggtggtg
aggaagctagtgcgtattgaagatttctcccggttagaaatcgctcggagtcttcaggaa
gatctctctcagaagccgagcatccactcagacctgcagcgcatcaaccagagagtggag
cagagactgctgcagaacagagaggaacagaacacctga
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