Ictalurus punctatus (channel catfish): 108271811
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Entry
108271811 CDS
T04658
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108271811
03041 Spliceosome [BR:
ipu03041
]
108271811
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108271811
Spliceosome [BR:
ipu03041
]
Complex C
Other components
EJC/TREX
108271811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
108271811
NCBI-ProteinID:
XP_017335082
Ensembl:
ENSIPUG00000022811
UniProt:
A0A2D0RX58
LinkDB
All DBs
Position
11:complement(25193727..25198786)
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AA seq
474 aa
AA seq
DB search
MDKKKKQYNVTASSLVDLKAELYRKQEAFKQDKLAQDAGTASKSHNHTKKPSVWSKQNQG
VTARAQKDVEKTAEEEQNLDRSRQKLEEKARLYEQMTKGDFPDEETESLYLVDFTQKIIE
QKRAAQSRQDEAGDRDGEGSETRLPVPPPQSADEEWVDYVDALGRSRKCLRKDLHQFQKM
DQDLHSKRVVGADRTLLSEDMRREMQREQWEREEEEQMKRPVGPVHYEDIRDGEARDLGV
GYYAFSQEEDQRKKQRETLDMLRDQTAEQRTKREHLKEKRKALLEARLAKVRMRKTKKSK
MDPGAEEEEEAPVPDGAVKEGEDDPEDAIGPPPAPEAAAKKVEVEIQERKDSRPGVPHVR
EWDRGKEFTWGQWTTQRRDERDSDFAPPSSYFLDERRAGRGRSTQEVRGKGKPGFKRSEA
HGGWDQDGTERRAQNTHASFTDQSSSSQPQQTSRAHSAQTHDLDALLSFYKNSV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaaaaacaatataatgtcacagcttcatcgctggttgatttgaaagca
gagctttataggaaacaggaggcgttcaagcaggacaaacttgctcaggatgcagggact
gcatccaaatcacacaaccatacaaagaaacccagtgtatggagtaaacagaaccaagga
gtgactgcacgtgctcagaaggatgtggagaaaacggcagaggaggaacaaaacctggac
agatcgaggcagaagctggaggagaaagcacgcctctatgagcagatgactaaaggggat
tttccagacgaggagacggagagtctgtacctggtggatttcacacagaagataatcgag
cagaagagagcagcacagagcagacaggatgaagcaggagacagagatggagaaggatcg
gagacgcgcctccccgtccctcccccacagagcgctgatgaggaatgggtggactatgtt
gatgcgctgggtcgatcaagaaagtgtttaagaaaagatttacatcagtttcagaaaatg
gaccaagatttacacagcaagcgagtggtcggagccgataggacgttgttgtctgaagac
atgaggcgagagatgcagagagagcagtgggagcgggaggaagaagagcagatgaagaga
cccgtaggacccgttcactatgaagacatccgagatggagaggccagagatctgggtgtt
gggtattacgctttttctcaagaggaagaccagcgcaagaagcaaagggaaactctggat
atgctgagagaccagaccgctgagcaacgcaccaagcgagagcatctgaaggagaaacgg
aaagctctgctcgaggctcgactggctaaagtgagaatgaggaagacgaagaaaagcaag
atggatcccggagccgaggaggaggaagaagctcctgtgcctgatggagcggttaaagaa
ggcgaggacgatcccgaggatgcgatcggacctccacctgctcctgaagccgccgccaaa
aaggtggaggttgaaatccaggagagaaaagactcgagaccgggagtgccgcatgtcaga
gagtgggacagaggaaaagagttcacatggggtcagtggacgactcagaggcgggacgag
agggattcggattttgccccgccctcgtcttacttcctggatgagagacgagccggtcga
ggcaggtcgacgcaggaagtgcggggcaaagggaaacccggtttcaaacggtctgaggcg
cacgggggatgggatcaggatggcacggaaagacgagctcaaaacacgcacgcatctttt
acagaccagagctcgtcctcacagcctcagcaaacgtcacgagcacattcggcacagaca
cacgatctggacgcccttttatccttctataaaaactctgtttga
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