Ictalurus punctatus (channel catfish): 108271838
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Entry
108271838 CDS
T04658
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
Ig_2
ig
LRR_4
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
C2-set_3
C1-set
LRRCT
DHU1_N
Motif
Other DBs
NCBI-GeneID:
108271838
NCBI-ProteinID:
XP_017335165
Ensembl:
ENSIPUG00000023642
LinkDB
All DBs
Position
11:complement(9526704..9551338)
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AA seq
1039 aa
AA seq
DB search
MAAGWPIPQALFMIILSAAVGLDPCPSACTCSETADGTKLLDCSRKTLSDPPVGIPAWVT
HVSLNNNELSGVPFLGDASSNITVLSLVYNRISEVVAEQLLPYSVLESLDLSSNSISELK
AGSFPPMQLKYLNLSNNKISSLEPDCFNNISSLLVLKINRNRLSLLSVKVFTLPQLQILE
LKRNKIRVVDSLIFKELKALKSLKMQRNGITKLMDGALFGLADMEELELEHNNLTELNKG
WLYGLHMLRALRLSHNNIGLVRADAWEFCRRLEELDLSYNHLSRLEDWAFSSLGLLQSLN
LGENRITHLGEGVFDSLANVRTLDIRNNDISLVIEDTVSLFAGMKKLNTLVLQKNNIRTI
TEKAFEGLKELEHLDLSKNRIISIHPEALSRLKLKSLELNTSGLLCDCNLRWLSQWLVDG
LFQQSCTAVCAYPTPLAGRSVFSIPLEDFVCDGFPRPQISGNPRTVVALRSTNVTLNCSA
FSTSDSSMNATWRKDKEVLSDAQVQNYARYQDQQLIYTSVLHLLNVNFTDEGRYHCVISN
NFCANYSTEAKVTVNELPSFLKTPMDLTIRTGTVARLECAAEGHPPPQIAWQKDGGINFP
AARERRMHVMPEDDTFFIANVKAEDMGVYSCTAKNEAGSLSANATLTVLETPSFQRPLED
RTVARGETAVLQCIARGSPAPRLNWTKDDGPLLLTERHFFAAANQLLIIVDARSADAGKY
TCIMSNTLGTERGHIYLSVSSSPNCEQAGGGYDPDGWTTVGIVVMVVVCCVVGTSLVWVI
VIYHMRRKSEDYSITNTDEMNLPADIPSYLSSQGTLSEPQEGYSNSEAGSHQQLMPSLTN
GYAHKGTDGVCYGDVGGEMDPETSGMLGNRVGSLFAGRSSFHPGEPRDSLVHMSNGLCAC
GSAPLVICSDCYDNANIYSRTRDYCHYSYLSEEDALDAQLPRDTRREGQHEDAALHDLIT
RDSQEPQHNALHHYRCKDVPSRSFWSGVDPHSSELSTGSVTVHKPPTGPSNGNDHEERTG
GLEEASYRTNPQDQNPPNT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttggcccatcccccaggccctgttcatgatcatactgagtgctgctgtg
ggcctggacccgtgtccgtcagcctgtacctgttcagaaactgcagacgggactaaactt
ttggactgcagtcggaaaacgctgtctgaccctcctgtgggaatcccagcatgggtcact
catgtgtctctgaataataatgagctctcaggtgtgccttttcttggagatgcttcctca
aacatcactgtgttgtctctggtgtataaccgaatctctgaagtggtcgctgaacagctt
cttccctattcagtcctggaaagtctggatctgagctccaactccatctccgagctgaaa
gctggatcatttcctcctatgcagctaaaatacctgaatctgagcaacaacaaaatcagc
tctctagagccggattgctttaataacatcagctctcttttggtgctgaagatcaacaga
aaccggctatcactactgtccgttaaagtgttcactctgcctcaactgcaaattctggag
ttaaaacgcaataagatcagagtagtagacagtttgatcttcaaagaactgaaggctctg
aagtctctgaagatgcagaggaacggcatcacgaagttgatggatggagctctttttgga
cttgctgatatggaggaattggagctggagcacaataatctcaccgagttaaataagggc
tggctgtatggcctgcacatgctccgtgcgctccgactcagccacaacaacatcggtctc
gtccgagccgacgcctgggagttctgccgccgcctggaagaactagatctgtcctataat
cacttgagtcgtctggaggactgggctttctctagccttgggctgctgcagagtctaaac
ctgggcgagaatcgcataacgcatctgggagagggagttttcgacagcctggcaaacgtc
cgcacactagatatccgtaacaacgacatatctcttgttattgaggacacggtcagcttg
tttgcaggcatgaaaaagctcaacacgttggtacttcagaagaacaacatcagaaccatc
acggagaaggcttttgagggtctgaaagaactagagcatttagatttgagtaagaaccgg
atcatctctattcaccctgaggcattatctcgcttgaaactcaaatccctcgagttgaac
accagcggtctcctctgtgactgcaatctgaggtggctcagccaatggctcgttgacggc
ctcttccagcagtcctgcaccgctgtgtgtgcatatcccaccccgttggcaggccggagt
gtctttagtatccccctggaagattttgtgtgtgacggcttccctcggccacagattagc
gggaaccccaggacagtggtggccctgcgcagcaccaacgtcactctcaactgctctgcc
tttagcactagcgactcttccatgaacgccacctggaggaaagacaaagaggtgctgtct
gatgcgcaggtgcaaaactatgcccgctaccaggaccagcagctcatctacaccagcgtt
ctccatctgcttaatgttaacttcactgatgaaggacgctaccactgcgtaatttccaac
aacttttgtgccaactactccactgaggccaaagtgactgttaatgagctgccctccttc
ctgaagacacccatggacctgactatccggactggcaccgttgcacggttggagtgtgcg
gcagagggacaccctcccccgcagattgcctggcagaaggacgggggcatcaacttccct
gctgcccgtgagagaaggatgcatgtcatgcccgaagatgacacctttttcatcgccaac
gtgaaggccgaggacatgggtgtgtacagctgcactgccaaaaacgaggcgggcagtctg
tcagccaatgccacattgactgtgctggagacgccatcattccagcgccctctagaggat
cgtacggtagcacgtggcgagactgctgttcttcagtgcatagcacgcggtagccccgcc
ccacgcctcaactggacaaaagatgatggcccattgctactcacagagcgtcactttttt
gcagccgccaatcaactccttattatcgtggacgccaggtctgcggatgcagggaaatac
acctgtattatgtccaacacgctggggacagagcgaggacacatctacctcagtgtctcg
tcctctcccaactgcgagcaggcgggcggtggctatgacccggatggctggactacagtg
ggcattgtggtgatggtggttgtgtgttgtgtggtgggcacatcgctggtttgggtgata
gtcatctaccacatgagacgcaagagcgaggactacagcatcacgaacacagatgagatg
aacctgccagcagacatccccagttacctgtcatcccagggcacgttgtctgagcctcag
gaaggctacagcaactctgaggcaggcagtcatcagcagctcatgccgtccctgactaat
ggctatgctcataaaggaactgatggtgtgtgttacggtgatgtgggaggcgagatggac
ccagagaccagtgggatgctgggtaatcgtgttgggtccctgtttgctgggcgcagcagc
ttccatccgggagagccaagggacagtctggtgcatatgtccaatggtctgtgtgcatgt
ggtagcgccccattggtcatctgctcagactgttatgacaacgccaacatctactctcgc
acaagggactactgccactactcatatctgagtgaagaagatgctttggacgcccagctg
cccagagacacaagaagagaggggcagcatgaggatgcagcgctgcacgacctgatcacc
cgagactctcaggagccccagcacaacgccttacaccactaccgttgcaaagatgttcca
agcagatcgttttggagtggcgtagaccctcattcctctgagttgtccacgggttcagtg
actgtccacaagccaccaacaggtccctctaatgggaacgaccatgaggaaagaacagga
gggctagaggaagcctcgtacaggactaaccctcaggatcagaaccctccgaacacatag
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