KEGG   Ictalurus punctatus (channel catfish): 108271868
Entry
108271868         CDS       T04658                                 
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04137  Mitophagy - animal
ipu04140  Autophagy - animal
ipu04144  Endocytosis
ipu04145  Phagosome
ipu04148  Efferocytosis
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108271868
   04145 Phagosome
    108271868
   04140 Autophagy - animal
    108271868
   04137 Mitophagy - animal
    108271868
   04148 Efferocytosis
    108271868
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108271868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108271868
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108271868
   04031 GTP-binding proteins [BR:ipu04031]
    108271868
Membrane trafficking [BR:ipu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    108271868
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108271868
  Exosomal proteins of other body fluids (saliva and urine)
   108271868
  Exosomal proteins of colorectal cancer cells
   108271868
  Exosomal proteins of bladder cancer cells
   108271868
GTP-binding proteins [BR:ipu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    108271868
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase ATP_bind_1 cobW nSTAND3 Septin PduV-EutP AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 FLYWCH_N SRPRB ATPase_2 AAA_5 G-alpha NACHT NB-ARC AAA_14 ATP-synt_ab ABC_tran
Other DBs
NCBI-GeneID: 108271868
NCBI-ProteinID: XP_017335236
Ensembl: ENSIPUG00000017200
UniProt: A0A2D0RYI4
LinkDB
Position
11:13263908..13267200
AA seq 207 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPTTFKTLDSWRDEFLIQASPRDPDNFPF
LVLGNKIDLENRQVATKRAQAWCQSKNNMPYFETSAKEAISVEQAFQTIARNALKQETEV
ELYNEFPDQIKLDRNDSSSSSAQSCGC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcatccaggaagaaagttcttctaaaagtcatcatacttggggattcaggtgttgga
aagacatctttaatgaaccagtatgttaacaagaaattcagtaatcagtacaaagctaca
ataggagctgactttcttacaaaggaggtgatggttgaagacagacttgttactttgcag
atttgggacacagctggacaggaaaggtttcagtcactgggcgtggcattttatcggggt
gctgactgctgtgtgctggtgttcgatgttactgctccaaccacatttaagaccctggac
tcctggagagatgagtttttgattcaggccagtcctcgtgacccagacaacttccctttc
ctggtcctaggcaacaagatcgacctggaaaacaggcaggtggcaacaaagcgagcacag
gcatggtgtcagagtaaaaacaacatgccatactttgagaccagtgcaaaagaggccatc
agtgttgaacaggcatttcaaaccattgcacgaaatgctctaaaacaggaaacagaagtt
gagctttataatgaatttccagatcagattaagttggacagaaatgacagctccagctca
tcggcacaaagctgcggctgctaa

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