Ictalurus punctatus (channel catfish): 108271868
Help
Entry
108271868 CDS
T04658
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
ipu04140
Autophagy - animal
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108271868
04145 Phagosome
108271868
04140 Autophagy - animal
108271868
04137 Mitophagy - animal
108271868
04148 Efferocytosis
108271868
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108271868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271868
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108271868
04031 GTP-binding proteins [BR:
ipu04031
]
108271868
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
108271868
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108271868
Exosomal proteins of other body fluids (saliva and urine)
108271868
Exosomal proteins of colorectal cancer cells
108271868
Exosomal proteins of bladder cancer cells
108271868
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
108271868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
RsgA_GTPase
ATP_bind_1
cobW
nSTAND3
Septin
PduV-EutP
AAA_16
AAA_7
NTPase_1
AAA_22
AAA_24
FLYWCH_N
SRPRB
ATPase_2
AAA_5
G-alpha
NACHT
NB-ARC
AAA_14
ATP-synt_ab
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108271868
NCBI-ProteinID:
XP_017335236
Ensembl:
ENSIPUG00000017200
UniProt:
A0A2D0RYI4
LinkDB
All DBs
Position
11:13263908..13267200
Genome browser
AA seq
207 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPTTFKTLDSWRDEFLIQASPRDPDNFPF
LVLGNKIDLENRQVATKRAQAWCQSKNNMPYFETSAKEAISVEQAFQTIARNALKQETEV
ELYNEFPDQIKLDRNDSSSSSAQSCGC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaggaagaaagttcttctaaaagtcatcatacttggggattcaggtgttgga
aagacatctttaatgaaccagtatgttaacaagaaattcagtaatcagtacaaagctaca
ataggagctgactttcttacaaaggaggtgatggttgaagacagacttgttactttgcag
atttgggacacagctggacaggaaaggtttcagtcactgggcgtggcattttatcggggt
gctgactgctgtgtgctggtgttcgatgttactgctccaaccacatttaagaccctggac
tcctggagagatgagtttttgattcaggccagtcctcgtgacccagacaacttccctttc
ctggtcctaggcaacaagatcgacctggaaaacaggcaggtggcaacaaagcgagcacag
gcatggtgtcagagtaaaaacaacatgccatactttgagaccagtgcaaaagaggccatc
agtgttgaacaggcatttcaaaccattgcacgaaatgctctaaaacaggaaacagaagtt
gagctttataatgaatttccagatcagattaagttggacagaaatgacagctccagctca
tcggcacaaagctgcggctgctaa
DBGET
integrated database retrieval system