Ictalurus punctatus (channel catfish): 108271935
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Entry
108271935 CDS
T04658
Symbol
si:dkey-197j19.6
Name
(RefSeq) actin nucleation-promoting factor WAS isoform X1
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04517
IgSF CAM signaling
ipu04520
Adherens junction
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108271935 (si:dkey-197j19.6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108271935 (si:dkey-197j19.6)
09144 Cellular community - eukaryotes
04520 Adherens junction
108271935 (si:dkey-197j19.6)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108271935 (si:dkey-197j19.6)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108271935 (si:dkey-197j19.6)
05100 Bacterial invasion of epithelial cells
108271935 (si:dkey-197j19.6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271935 (si:dkey-197j19.6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108271935 (si:dkey-197j19.6)
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108271935 (si:dkey-197j19.6)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
108271935 (si:dkey-197j19.6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
Motif
Other DBs
NCBI-GeneID:
108271935
NCBI-ProteinID:
XP_017335405
UniProt:
A0A2D0RZL9
LinkDB
All DBs
Position
11:complement(24909283..24915305)
Genome browser
AA seq
265 aa
AA seq
DB search
MSRVLSSLLSIRENGLVFNLLGSDCSASACAVVQLYLATTAGKGKTSEWQFHSCGVVCLV
QDKKLHSTFIRLFCVKRAKLLWEQELYTSFTYSTPCAFFHTFPGDECWAGLNFSDEDEAS
RFNTAVQNCISGTKARPVFVRTHSLDSASGWLLKNKLSTCLSLSRSASPKAPPPVESDET
STLSLAQKKGPLPPIPYNSDAETSVPSHQDHLKQRHSIPRPPSYPAPNLNMNPAGVKKSA
SFSPGGNYAFTVSKQERSLHFTDNI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggtgttaagttctctcctgtcgatccgtgagaacggcctcgtctttaacctg
ctcggctccgactgcagcgcgtcagcttgtgccgtggtgcagttatacctggcaactacg
gctggtaaaggaaaaacatccgaatggcagtttcacagttgtggagtggtctgtctggtg
caggataaaaaattacattcaacatttatacggctcttttgtgtgaagagggccaagctg
ctctgggaacaggagctgtatacatcgttcacgtattccacaccctgcgcctttttccac
actttccccggtgatgaatgttgggcggggctgaacttttccgatgaggacgaggcgagc
cggttcaacacagctgtacagaactgcatcagcggcactaaagcgcgtcccgtgttcgtc
cggactcacagtctggactcggcctccggatggctgctgaagaacaaactgagcacctgt
ctgtctctcagccggtctgcgtcccctaaagctccaccgcctgtagagtcagacgagacc
agtactctttctctggcacagaagaaaggacccctgccacccatcccttataacagcgac
gcagagacgtctgttccatctcaccaggatcatcttaaacagaggcattcgattccacgc
cctccgtcgtacccagcccccaacctgaacatgaatccagcaggagtgaagaaaagtgcc
agcttttcaccgggaggaaattatgcttttaccgtctcgaaacaggaaagaagcttgcat
tttactgataacatatga
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