Ictalurus punctatus (channel catfish): 108271943
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Entry
108271943 CDS
T04658
Symbol
rereb
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271943 (rereb)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108271943 (rereb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
Myb_DNA-binding
CCDC47
Myb_DNA-bind_7
Myb_DNA-bind_6
DUF7573
Motif
Other DBs
NCBI-GeneID:
108271943
NCBI-ProteinID:
XP_017335419
UniProt:
A0A2D0RY45
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Position
11:complement(13364822..13381721)
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AA seq
1219 aa
AA seq
DB search
MDDLFSPRRQLNSTQGEIRVGPSHQAKLPELQPLPTPSLDSVTEKEELVWTPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESQYDAAKALQCLVKKPV
PKLIEKCWSEDEVKRFIKGLRQYGKNFFRIRKELLPSKKTGELITFYYYWKKTPEAVGSR
PQRQHRRQPASRKVKTRNTVANANTNSRTSSMELSSASEDDIDSEDSEQGEKGQVCSHCL
TTSSKDWHHGGRDNVLLCTTCHAHFSKHRRLPPVPKPADPPYLFKPVRDEDEGLGARQGM
KTRRSRASMSSLRSGRNRLTGSPDTSLSPFNDEVRASGHASRTGSSAMATRASSADAKAM
AGKAGKKIKVEASLVKGIKRQRDTTAPDTDEPERKTMKRPKNQEVPDSQSEGEGEGESSD
SRSANEDGSSDTKDIDQDNRSSSPSLASPLPANESDLDSPVPPPQPPAGPQSQSQQPVTT
IAAATPAPSQTPPALPPQPLQSSVSSPGVSTITTTGSTTTTSRVVVPVDVPKDDPSVIAH
RRSQRCSEAPPTSQPPTGLTSFQGPGPGQGQSFPPSAPHYHHHHSQVQNHPSSAHHPHGF
GPKHLQLQRDSLHSPMPPTSASQIKPPPTTPIPSSHKPIPPISAPPPFLQIHPNLPPPPA
LKPLASLPAQHPPCSQPPPLHIMPQPHPHPQPQPQLPVLTQSQGHQSKSLITSLPPTSAS
PCPHPLLSQNRPMPESTAPFTLSSSSAAVPGPQPSTSSGPSVPAGPALVTIKQEPVDEDE
NCESPPPPHRTPSPEPTVVNIPSHASQSARFIKRLNRGYNSCARTDFYFTPLANSKLAKK
REEAAERLRREAEQSARQSRERERERERERERERERERDSDKASRASSSSHEGRVGDLPL
AGPMPPGRPSFEAPAAAAVAAVPPYLGPDTPALRTLSEYARPHVLSPGTHRGGHAFFTPL
GPADHLLAYHMQGLYAADPALRELREREIRERMKPGFEVKAPELETPLHPSHNPMDHLGR
HGALALPHPFGPYHPAMERNMVRPELTYAERLTAERLHAERMAASAVDPVTRLQMLNVTP
HHHQHSHIHSHLHLHQQDPLNQGSGPHPLVEPLGGGPPLARFPYPPGALPNPLLSELPHE
HDMLRHPLFGAAFPRELPGPLGPMSAAHQLQAMQAQSAELQRLALEQQWLHGHAHLHGAP
HPSQEDYYSRLKKEGDKQP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgttcagtccgcgaaggcagctgaacagcacgcaaggggagattagagtg
ggtccaagtcatcaggccaaactccctgagctgcagccacttcctacacctagcttagac
tcagtgacagagaaagaggagctagtctggacaccaggggtcaacgactgtgaccttctc
atgtacttgcgtgctgccaggagcatggcagcgtttgcagggatgtgcgatggagggtca
acagaggatggctgtcttgcagcctcccgcgatgataccacattgaatgcattaaacacg
ctccatgaaagccagtatgatgcagccaaagctcttcagtgcctggtgaagaaacctgtc
cctaaactcatagagaaatgctggtcagaggatgaagtgaagagatttatcaaaggtctc
aggcagtacggcaaaaatttcttccggatccgcaaagagctgctccccagtaagaaaacg
ggtgaattaattaccttctactactactggaagaaaactcctgaagctgtggggtcacga
ccgcagcgtcagcaccgcaggcagcctgcatctcgcaaggtcaaaactcgaaacaccgta
gcaaacgccaacaccaactcccgcacctcatctatggagctgagttcagccagtgaggat
gatatagacagtgaggacagtgagcagggggaaaaaggacaagtttgcagccactgtcta
accaccagctctaaagactggcatcatggaggtcgtgacaatgtcctgttatgcacgact
tgccatgcccactttagcaaacatagacggctgccacctgtgcccaagccagccgatcca
ccgtacctgttcaaacctgtgcgagacgaagatgaagggcttggtgcacgtcagggaatg
aagacacggcgcagcagagcatcaatgtcttccctgagaagtgggcggaaccggctgaca
ggaagccccgatacaagtctgtctcctttcaatgacgaagtccgagctagtggccacgcc
tccagaactggctcctctgctatggcaacaagggcatccagtgctgatgcgaaagctatg
gctgggaaggctgggaagaagataaaagtggaagcatccttagtaaaaggaattaagaga
cagcgagacaccactgcaccagatacagatgaaccagaaagaaaaaccatgaaaaggcca
aagaatcaagaggttccagactcccagtcagaaggagaaggtgaaggtgaaagctcagac
agccgcagtgctaatgaggatggcagcagtgatactaaagatatagaccaggacaaccgc
agttcctccccaagcctcgccagccccttgccagccaatgagagtgatttagactcacct
gtccctccacctcaacctcctgctggaccacagagccaatcacagcaacctgttaccact
atagcagctgctactccggctccctctcagactccacctgctctgccacctcagccccta
caatcaagcgtatcttcacctggagtttctaccatcactaccaccggcagcaccaccacc
acttcacgggtcgttgtccctgtggatgttcccaaggatgatccttctgtcatcgctcat
aggaggagtcaaaggtgttcggaggctcctcccacatcccagcctcccactgggctcact
tctttccagggaccaggtccagggcagggccaatctttccctccgtctgcccctcattat
caccaccatcacagtcaggttcagaatcatccatccagtgcccatcatcctcatggattt
ggtcctaagcaccttcaacttcagcgggatagcctccattctcctatgccaccgacatct
gcatctcaaatcaagcccccaccaactacccctatcccctcatctcacaagccaattcct
ccaatttctgctcctccaccattcctgcagatccaccccaatctgcctccacctccagca
ttaaagcctctggcctctttacctgctcagcatcctccctgctctcaacctcctcccttg
cacattatgccccagcctcatcctcatcctcagcctcagcctcaactgcctgtgttgact
cagtcccagggccatcaaagcaaaagtcttattaccagccttcctccaacctcagcctca
ccctgtcctcaccctttgctctctcagaaccgtcctatgcctgaatccactgctccattc
actctatcctcatcttctgctgcagtcccgggcccacagccatccacttcctctggacca
agtgtgcctgctgggccagcgcttgtgaccatcaaacaagagcctgtagatgaagacgag
aactgtgaaagcccgcctcctccacataggactccctcacctgaacccactgtggttaac
atccccagccatgcaagccagtctgccaggttcatcaaacgtctgaacagaggctacaat
tcctgtgctcgcacagacttctactttacccctcttgctaactctaaactagccaagaaa
agggaggaagctgctgaaagactcagaagagaggcagagcagagtgctcgtcagagtcga
gaaagagagagggagcgtgagagggagagagaaagggagcgggagagagaaagagattca
gacaaagcttctcgagcctccagctcttcccatgaagggcgtgtgggggatttgccattg
gctggacccatgccaccaggacgcccatcatttgaggccccagccgcggcagcagtggcc
gccgtccctccttacctcgggcctgatacacctgctctgcgtacactcagcgagtatgca
cggcctcatgtcctatcgcctggcacccatcgtggtggccacgccttcttcacacccttg
gggcctgctgaccacttgctggcctatcacatgcagggcctatacgcagctgatcccgca
ctacgggagttgcgagagcgtgaaatccgtgagagaatgaaaccgggctttgaggtgaaa
gcacctgagctggagacacctctgcatccatctcacaatcccatggatcatttgggccgc
cacggagctctggctctaccacacccatttgggccataccacccagccatggagcgcaac
atggtgcggcctgagttaacgtatgctgaacgactgactgcagagcgactccatgctgag
aggatggcagcatctgctgtagaccccgtgaccagacttcagatgctcaatgtaacacca
catcaccaccagcattcacacatccactcccacctccatctacaccagcaggacccactc
aaccagggttctgggccccacccactggtggagccgttgggaggaggtccccctctggcc
cggttcccctacccaccaggtgcacttcccaacccattgctcagtgagttgccacatgaa
cacgacatgctgcggcaccctctcttcggagcagcattcccaagagaattaccaggacca
ctgggtcccatgtcagctgcacatcagctgcaggccatgcaggctcagtcagcagagtta
cagagactggcactggagcagcagtggctacatgggcacgcacacctgcacggtgctcct
caccctagccaagaagactactacagccgtctgaagaaagagggagacaagcagccttga
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integrated database retrieval system
