Ictalurus punctatus (channel catfish): 108271973
Help
Entry
108271973 CDS
T04658
Name
(RefSeq) methyl-CpG-binding domain protein 6
KO
K26585
methyl-CpG-binding domain protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108271973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108271973
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108271973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
108271973
NCBI-ProteinID:
XP_017335465
Ensembl:
ENSIPUG00000024415
UniProt:
A0A2D0RZS8
LinkDB
All DBs
Position
11:complement(7972369..7991052)
Genome browser
AA seq
1446 aa
AA seq
DB search
MTGGSEKAAGKKDGGPTLTAQVPVGWQRKVEDGAVAYISPSGKVLCSVEEVRVYLLTDGT
CKCGLECPLVLHKVFNFDPTAGVHSQSHQSGKVEEDMTKLCNHRRKVVAMAALCRSMQVS
QIPLPAHGSGSGVCSADGKNKRGSIVARGDVAQRTYPTQLILNQARPSSSGSFPVPSPLS
LIQNGSVSHTTSILTSDPSSPLKKTSPQSPGPSVAVYGKQQWSPRPALTQTILQRAPHKP
TSPSTTKLDAAQTYQTDCSLPLFTSPPSSSSPVIARAGQPYLQGIVMKSSPPLCSSPSRA
QDTFSPHQRSRHSSTSSLSEGTPGSMLAQGVKPSPSPSPLPPAQPCSSPKLSVPPVSPRS
RLEGILQHYKDCSTTNPDSTQQHHTSSSKTKLHTLQNPQPAQNNSSDKRNGPVLGSAPGL
IGLPLGQILCQQKSQQHISSSFPASSLLSAAAKAQLASQKNQSQSRAAETGALPLPALDK
EQQSKVLISTLNSSLSTPTAPTQSLTAFLLPPSPSLPVSNPAQSEKTLRRKRQRRSPTVL
SMLKESQINRTVASSPIVPSPSLSSSSSPPVTNSENHLQPARLPGVPPSTTPVPNSVLRQ
TELEEGKRMALSNSLPLSSPPASSQPLSALLQLLSMQNAQNNTTTTVPPSRHTPLVTSHT
PQYDGQLVPQTHIHMKQSQPQTLVPALDSLTQLATTQPLSLTCEDTEAVAVNLKTTANSP
VLNLSLPHTSTSAGTEPSISYHTLDVMSQLSSATCLSASTISEKTCASKLGDMGPDHNIY
QTNQPDQNQATDSEGPVMSEEQHNLETKLLSGCDPDTNLSLAHAPGTSSADLQNSAADHA
STLQLAESFPFMTQEQLLQLLSSNAALPSLLPPFLGSLPLGLWTGTQAPPTGGTQTPQPA
NNLLNQASPLNVLPSALGPQGDLPLNLVSLLNPPAPGMGPGVAPGLEAGEKNPGLQALLM
ASLLLGQNPAAMLPLPGLNLDLPPLQQQVFGEGMSLEKTPALLDSVLMGPGLLDALQALA
SPADGQSLLLSAQLTPPPPPAFLSLNPALLAAALAQAETLPNHTPSPPSHTQGTLSSPAL
VSTSVSCTPLVPVTGQETCDSLTEQEKTNSQTPQFLPTILPQGVLSDLAALGNINSLHGL
LAAGPLLLSQAPSLGMSLPQNQAALNPLTCLQLSMGPTLMEEKPLAVHETTPAQEDLPPS
QLCQDSLLNPGHLQPPTQQREEPAGAEPGLIDPYGSFMDTIYTSFLQVSGRGSEGGSDST
PLSYPELAPSLSPRRACSVHNPDLSRLSMEAAQSPARGTPKLSEDPPTTPPCKPAESHPP
DAPVHLTFMEEAKTDCSAKLCVYSNGIGAGVRRDDDGEEERRQPPGYLSPRERVNIDPVD
DTMGNVDAEQGRALEMRTGARRGRKRKQTLQRGPEFPGDIERIIEEPAATIALQRPARGK
RRRVVR
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgactgggggcagtgagaaggcagcaggaaaaaaagatggtggtccgacactcaccgct
caggtccctgttggctggcagagaaaagtggaggatggggctgtggcatacattagccca
agtggtaaagttctgtgttctgtggaagaggtgagggtgtatctgttgacagatggcaca
tgtaagtgtggactggaatgcccacttgtccttcataaggtgttcaactttgaccctact
gcaggggttcattctcagagtcatcagtcagggaaagtggaagaagatatgaccaaactg
tgcaaccatcgcaggaaagtagtcgccatggctgctctgtgtcggagtatgcaggtttcc
caaataccattaccagctcatggctcagggagcggtgtgtgctcagcggacggcaagaat
aagagagggtccatagtggctcgaggagatgtagcccagcgcacttacccgacccagctg
atactgaaccaggccagacccagcagcagtggcagctttcctgtgccctcacctctttct
cttattcagaatggatctgtatcccacaccacctccatactgacttctgatccgagctca
cctttaaagaagacctctccccagtccccagggcccagtgtagctgtttatgggaagcag
cagtggagccctcgccctgcccttacacaaaccattctccaaagagcacctcataagcca
acctctcccagcactacaaaactagacgcagcccagacgtatcagacagactgttccctt
cccttgtttacttcacccccctcttcatcttcacctgtaattgccagggcaggacagcct
tatctacagggaatagttatgaaatcttcccctcctctctgttcatccccttctcgtgct
caggacactttctcccctcaccagcgatcccgtcactcatcgacctcctctctctctgag
ggaactccaggatccatgcttgctcagggggttaaaccttcaccttccccttctcctctg
cctcccgcccaaccttgctcttcacccaaactctccgtacccccggtcagcccacgcagt
cgtctggagggcattttgcagcactacaaagactgcagcaccaccaatcctgactctacc
cagcagcaccacacatcgagcagcaaaaccaaacttcacacgctgcagaacccacagcca
gcccagaataattccagtgataagaggaatggaccagtactaggttctgccccaggactg
attggtcttcctttgggtcagatcttgtgtcagcagaagagccagcagcacatcagcagc
tctttcccagccagtagcctcctttctgcagctgccaaagcccagttggccagccagaaa
aaccagagccagtccagggctgcagaaacaggtgcccttcctcttccagccctagacaag
gagcagcagtccaaggtattaattagcactttaaacagtagcctcagcacccctacagcc
ccgacccaatctttgacagctttcttgcttcctccctcgccctctctccctgtgtcaaac
cctgctcaatctgaaaaaacattacgccgcaaacgccagcgtcgctcacccactgttctt
agcatgctgaaagaatcgcagataaaccgaactgtggcatcatcccctatcgtcccttcc
ccttctttatcgtcctctagctctcctcctgtcactaactcagaaaaccacctccagcct
gcacgcttgcctggcgtgcctccttccaccactcctgtgcctaatagtgtactaaggcag
acggaattggaagagggcaagaggatggctctttcaaattcccttcctctctcctcaccc
cctgcttcctcccagcccctctctgccctgcttcagctcctcagtatgcagaatgcccag
aacaacactacaacaacggtaccacccagcaggcacacacctttggttacctctcatacg
cctcagtatgacggccagcttgtaccacaaacacacatccacatgaaacagtctcagccc
caaaccttggtccctgctttggattctcttacccagctggcaactactcagcccctttct
ctgacgtgtgaagacacagaagcagttgcagtaaacctcaaaacaacagcaaatagtcca
gttctgaacttgagcctgcctcacacaagcaccagtgcaggaactgagccttccattagc
tatcatacccttgatgtgatgagccagctgtcatcagccacctgcctgtctgcttccacc
atatcagagaaaacctgtgcatccaaactaggggatatgggacctgatcataacatttac
caaacaaaccagccagaccaaaaccaggctacagatagtgagggtcctgtaatgtcagaa
gagcagcacaatttggagactaagctactttctggctgtgatcctgacactaacctctcc
ctggcacatgcacccggcacctcttcggccgatctccagaactctgcagctgaccacgcg
agcaccttgcagctggccgagtctttccctttcatgacgcaggaacagctcctccagctt
ctctcctcgaatgcagccctgccctcccttcttccccctttcttaggttctctgcctctt
gggctctggacaggcactcaggctcccccaaccggaggcacccaaactccgcaaccagca
aacaacctcctcaaccaggcttctccactcaacgttctgccttctgctctgggacctcag
ggggacctccctcttaacctagttagtctattaaatcctcctgctccagggatgggtccg
ggtgtggctccagggcttgaggctggtgaaaagaaccctggactacaggcactgctcatg
gcatctttgcttcttgggcagaacccagctgccatgctcccactgccaggactcaattta
gacctccctcccctgcagcaacaggtatttggggaaggcatgtctttagagaagacccca
gctctgctggactctgtcttgatggggccaggactcttagatgccctccaggctctagca
tcacctgcagatggccagtcgcttttgctctctgcccagctcactcctcctccccctcct
gccttcctgtccctgaaccctgcactgttggctgcagctcttgcacaggctgaaaccctt
cccaaccacacaccatcccccccatctcatactcaggggactctttccagtcctgcactg
gtttctacctctgtgtcatgtaccccactggtaccagtcactggacaggaaacatgtgac
tcgctgactgagcaggagaagaccaacagccagacacctcaatttcttcccacgattctg
cctcaaggggtcctgagtgacctggcagctttggggaacattaatagtctacatggttta
ctagcagcagggcctttgttgctctcgcaggctccgtcgctgggaatgtcactgccacag
aaccaggctgcccttaacccactaacgtgcctgcagctgtctatgggtccaacactaatg
gaggagaaaccacttgcagtacatgagaccacacctgcacaagaagacctccccccttcc
caactgtgccaggattccctgcttaatcctggccacctacaaccacctacacagcagagg
gaagagccagccggggctgaaccagggctcattgacccatacggctcctttatggacact
atctacacttccttcctgcaggtgagtgggcgtggctcagagggagggagcgactccacc
ccactctcgtacccagagctcgcaccctctcttagtcctcggcgagcatgctcagtacac
aatcctgacctgtcccgcctcagcatggaagcagcccagtctccggcccgcggcacaccc
aaactcagcgaagacccgcccaccacgccaccctgtaaacctgcagagtctcacccacca
gatgcccccgttcatctcacatttatggaagaggcaaagactgactgctcagccaagctg
tgtgtctatagcaacggtataggtgcaggagtgagaagagatgacgacggtgaagaagag
cgaaggcaaccaccaggatacttgagccccagagagagagtgaacattgacccagtggat
gataccatgggtaatgtggacgcggagcaagggagggctttagaaatgcgtacaggagcc
aggagggggagaaaaagaaagcaaacgctgcagagagggccagagtttcctggagatatt
gagcgcatcatagaggagccagcagctacaatagcactgcagaggcctgcgagagggaaa
aggcggcgtgtggtcagatag
DBGET
integrated database retrieval system
