KEGG   Ictalurus punctatus (channel catfish): 108271979
Entry
108271979         CDS       T04658                                 
Symbol
rbm5
Name
(RefSeq) RNA-binding protein 5 isoform X1
  KO
K13094  RNA-binding protein 5/10
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108271979 (rbm5)
Spliceosome [BR:ipu03041]
 Complex A
  Other components
   Complex A specific factors
    108271979 (rbm5)
SSDB
Motif
Pfam: G-patch OCRE RRM_1 Zn_ribbon_RanBP G-patch_2 DUF7066 GSIII_N zf-C2H2_4 zf-C2H2_jaz GATA
Other DBs
NCBI-GeneID: 108271979
NCBI-ProteinID: XP_017335493
Ensembl: ENSIPUG00000000640
UniProt: A0A2D0RYB4
LinkDB
Position
11:complement(4945525..4957428)
AA seq 835 aa
MGADKRVSRTERSGRYGSEQSRDDDRRDRRDRDDRVYDSHRWSDDRRSDRYDGDRGDRSD
RYWSRDSPERGRKRRSSDCSEDGHHSDGDYSEHDYRGDPADEKESKTIMLRGLPVNITET
DIRAAIDQLEGPQPMDVRLMKKRTGISRGFAFVEFYHLQDATRWMETNQKLLTIQGKTVA
MHYSNTRHKFEDWLCNSCGLYNFRRRLKCFRCGAAKSDSDSSGTAGTTETQPSGDYYGDT
IILRNIAPLSTVEGIMASLAPYANLSPSNIRLIKDKQTGQNRGFAFVQLSSPLEASQLLT
ILQGLQPPLKLDGKTIGVDYAKSARKDLLLPDGNRISAFSVASTAIAAAQWSSSQPQQSV
DPASEYSYLQEGYVPYSQEYQAQYQQQAGATDPSQANGILGAAPGMKILPTAGAVVISQG
AQVYQPHIISQPATQTLQTMQTATITAAATISAPATSAVAISATTTANPAAPTSDVKTSA
PDTSTYQFDESSGYYYDPQTGLYYDPNTHYYYNSYTQQYLYWDSEKQAYVPATDCSSTAS
SSSTSAKESKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFRSSFQPISQEERKEAAAA
DAGFTLFEKKQAGGLERLVSEAVKTAEEESSSSKVGLVAAYSGDSEPEETPEGEEKEDKL
TDWKKMACLLCRRQFPSKEALIRHQQLSDLHKQNLEVHRRSKLSEAELEELERKETEMKY
RDRAAERREKYGIPEPPAPKKRKFTQPAPVVNYEQPTKDGLNSDNIGNKMLQAMGWKEGK
GLGRNQQGITAPIEAQMRTKGAGLGTKGSNYTLSASDTYKDAVRKAMFARFTEIE
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgggtgcagataaacgggttagccgcacggagcgcagtggcaggtacggttcagagcag
tcccgcgatgatgacaggcgagaccggcgagatcgcgatgatcgtgtgtacgactctcac
cgctggagcgatgatcggcgtagtgaccgctatgatggagacagaggggatcgtagtgat
cgctactggagccgagatagtcctgagcgaggtaggaagcggcgtagcagtgactgctct
gaggacggtcatcactcggacggtgattactctgagcatgactacaggggagacccggca
gatgaaaaggagagcaagaccatcatgctccgtggtctgcctgtcaacatcacagagacg
gatattcgagcagccatagaccagttggaggggcctcagccgatggatgtgcggttgatg
aaaaagagaacaggtataagccgaggtttcgccttcgtggagttttatcacttgcaagat
gctacccgatggatggagaccaatcagaagctgctgaccatacagggcaagactgttgcc
atgcactacagtaacacacggcacaagtttgaagactggctttgcaactcgtgcggcctg
tacaatttccggaggaggctcaagtgtttcagatgtggtgctgctaaatcagactcggac
agcagtggaactgctggaaccacagaaacccagcccagcggtgattactatggagacaca
atcatcctgaggaacatcgcgccgctctctactgttgagggcattatggcatccctggca
ccatacgctaatctgtcacccagcaacatccgccttatcaaagacaagcagaccggacag
aacagaggctttgcctttgtccagctgtcctctcctctggaagcatcacagctcctcacc
atcctgcagggcctacagcctccgcttaaactggacgggaagaccataggggtcgactat
gccaagagtgctcggaaggacttgctgttgcctgatgggaaccgcatcagtgctttctct
gtagccagcacagctattgctgccgcccagtggtcctctagccagccacagcaaagtgtg
gatccagcatcggagtacagctacctgcaggaaggctatgtgccctattcacaggaatat
caggcccaatatcaacagcaggcaggagcaacagacccctctcaggctaatggcatactt
ggagctgctcctggaatgaaaattctcccaacagctggagcagtggtcatctcacagggt
gctcaggtttatcaaccccatattatcagccagccagccacacagactttgcagacaatg
cagactgcaactatcacagcagctgccaccatctcagcccctgcaacctctgcagtagcc
atatctgccacaactacagcaaatcctgcagctcccacttcagatgttaaaacttctgcc
cccgacacttccacttaccagttcgatgagtcgtctggctattactatgaccctcaaaca
ggtctctattatgaccccaacacacattactactataactcatacacgcagcagtaccta
tactgggacagtgagaagcaggcatacgttccagcaaccgattgcagcagcactgcttct
agttcttccacttctgctaaagagagcaaggagaagaaggagaagcccaaaagcaaaact
gctcaacagattgcaaaggatatggagcgttgggctaagagtctgaacaagcagaaggaa
aacttcaggagcagtttccaacccatcagccaagaagagaggaaagaggcagcagcagca
gatgctggcttcacactgtttgagaagaagcaggcgggtggtttggagaggcttgtatcg
gaggcagtgaagactgccgaagaggaaagttcatcctcgaaggtgggacttgtggcagcc
tatagtggagacagtgagcctgaggagactccagagggtgaggaaaaggaggacaaattg
acagactggaaaaaaatggcatgcctgctgtgcaggagacagttccccagtaaagaagcc
ctaatccgccatcaacagctctcagacctgcacaagcaaaacctggaggttcacagaaga
tctaagttgagtgaagcagagctggaggagttggagaggaaagagactgagatgaagtac
agagacagggcagctgagaggagagagaagtatggcattcctgagcctcctgcgcctaag
aagaggaagttcacgcagcctgcaccagtagtgaattatgagcagcccacaaaggatggc
ctgaacagtgacaacattggcaataagatgttgcaggctatgggctggaaggaaggaaaa
gggcttggcagaaatcagcaaggcatcacagcacctattgaggcccagatgagaacaaag
ggagcagggttgggtaccaaaggcagtaattacaccctctcagcctcagatacctacaag
gatgccgtgaggaaagccatgtttgcacgcttcactgaaattgaataa

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