Ictalurus punctatus (channel catfish): 108271984
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Entry
108271984 CDS
T04658
Symbol
sap130a
Name
(RefSeq) histone deacetylase complex subunit SAP130a isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108271984 (sap130a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108271984 (sap130a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
108271984
NCBI-ProteinID:
XP_017335505
Ensembl:
ENSIPUG00000011200
UniProt:
W5UQY6
LinkDB
All DBs
Position
11:16988701..17006292
Genome browser
AA seq
1060 aa
AA seq
DB search
MSSQQFPRAPLPSSGVGQGPAPAGNSTLIQGGQPGGEEGSREADHPQDSLPSGSVAGAAL
QFRDDKQETVVVRPYPQVQTLSQSPALAQHVSIQPNPTVAVAAPPAHLAPGQQSAFADGA
IKASLKSAMPSRLIAPAPAASQGHLPGPAKVPGHITVTLESSMPPASIPVATISSQQGQS
NLHHLMAANLQIIRSSTPALQISSPTAPPHPFTSHLPRGAAAAAVMSSTKGPTVLRPACG
ANAASGQPAAVQHIIHQSIPSRPAATTSTAVLPTVVAPISTARTQSPVISPPVTHTAEIV
HGRAGLTIHPPPATISIQRPPTPRDSATRITLPSHPAMGAQKAQPAHTMTQKSIFSTVTP
VAAATVAPILATNTLPSTTTTGSAPHSQMSSSTIVTMTMASHSSHATAVTSSAIPVAKVV
PQPIAHTSPRIQPEYSGERTNLIPISGHRSSPNPVTMEARSDNRPTVPVQFQYFLPTNQS
YAYPLSHAYTPITSSVSTIRPYPVTAQAPTSAIPAQAGVGVATTVHLNPMQLMAVDRIGL
QSAQISTQNIQPASMTAQGIQPPTIGVQGLHATAPISTQGIQQAPVTTQQPEAKPPAGVV
LAESTAFVTNPIGSTFSATQPITTVVQTHPQGTSTGAPTLVSSPRPSILRKKPVNEGAVR
KTLIPAQPNEPSSSRVDSGVRLAGSPRPAGVKPKPDIHVAMTPPVMATVEALPTHGGEQQ
PLSAPTPHLSQAIPALLAPPISAPPSQSAAVLSALPAAMAVTPPVPASMANAVSSPTQPA
ASSTAALSSVLPEIKVKQEAESMDASQPALSIPSSTAPASVFSSQASGLTVPHQPGDLLP
GASPRKKPRKQQHVISNEEGEMMETNSTDEERANTRTPGSKAERPESPPREYVDEEGVRY
VPVRPRPPITLLRHYRNPWKAAYHHFQRYTDIRVKEEKKNSLQDVANQRGVACRAQGWKV
HLCAAQLKQLTSLEHDAYSRLTTLQEGLISKKRAGADDDLHRINELIQGNMQRCKLVMDQ
VTEARDTMMKVLDHKDRVLKLLNKNGTVKKSSKLKRKERT
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagcagtttccccgggcgcccttgccttcttcaggagtgggacaaggccca
gcacccgctggcaacagcaccctcattcaaggaggccaaccgggtggagaagaaggcagc
agagaggcagaccaccctcaggactctctccctagtggcagtgtggctggagcggccttg
cagttccgtgacgataagcaggagacggtggtggttaggccctatcctcaagtgcagact
ttgagccagtctccagctttggcacagcacgtgtctatccagccaaaccccacagtcgct
gtagctgcaccaccagctcatctggccccaggccagcaatctgccttcgctgacggagca
attaaggctagcctaaagtctgctatgcccagtcgacttattgccccagctccagctgct
agtcaagggcaccttcctggacctgcaaaggtgcctggtcatattactgttaccctggaa
agcagtatgcctccagcctccatacccgtggcaaccatcagcagccagcagggacagagt
aatctgcaccacctgatggcagccaacctgcagatcatcaggagcagcacacctgcactg
cagatcagctctcctaccgctccccctcacccattcacttcccacctgcccagaggtgcc
gctgctgcagctgtgatgtcgagtactaaaggccctacggtactgagacctgcgtgtgga
gcaaatgcagcatctggtcaacctgcagccgtacagcacatcatccatcagtccattccg
tctcgacctgcagccaccacctccactgctgtgctgcccaccgtggttgcccccatttca
acagccagaacacagtctcctgttatcagccctccagttacacacactgcagagatagtg
cacgggcgtgcagggcttacaatccaccctcctcctgccaccatcagtattcagaggcct
ccaacaccaagagattcggccacacgcatcacactgccttcccatccagccatgggagct
caaaaagcccagcccgcacacaccatgacccagaagtctattttcagcactgtgactcct
gttgctgcggcaactgttgcccccatcttagctaccaatactcttccatcaactacaaca
acaggttctgcacctcacagccagatgagcagcagtacaatagtcaccatgacgatggca
tcccactcttcgcatgccacggctgtaaccagctctgccattcctgttgctaaagtggtt
cctcagccgattgcccacacttcccctcggatccaacctgaatattccggggagagaaca
aacctgatccccatctctggtcatcgctcctccccaaaccctgttactatggaggcccgc
agtgacaatagacccactgtgcctgtccagttccagtactttttacccacaaaccaatca
tatgcctatccgctttcacatgcctatacacccatcactagctctgtttccaccatccga
ccctatccagtcacagcacaggctccaacctctgcaattcctgctcaggctggtgtaggc
gtggccaccactgtgcatttgaaccccatgcagcttatggctgtggatcgcatcggcctg
cagtcagctcaaatcagtactcaaaatatccaaccagcttccatgactgcccagggcatt
caacctccaacaatcggagtacagggcctgcatgctactgcaccaatcagtacacagggg
attcagcaggcaccagtcaccacacaacagccagaggcgaaaccaccagcaggtgtagtt
ctggctgagagcactgcgtttgtgaccaaccctattggcagtacattcagcgctacgcag
cccatcaccactgtagttcagacacacccccaggggactagcacaggtgcacccacactt
gtctcttcacccagacccagcatcctccgcaagaaacctgtgaatgagggggctgtgcgt
aaaactttgatcccagcgcagccgaacgagcctagttcttcaagagtggatagtggcgtg
cgactggctggatccccacgaccagcgggagtgaagcccaaacctgacattcacgttgcc
atgacgcctccggtgatggccactgtggaggccctgcccactcatggtggagaacagcag
cccctctcagctccaactccgcacctatcacaggccattcctgctcttctggctccacct
atttccgcacctccctctcagtctgcggcagttctgtctgccctccctgcagccatggct
gtaacgcctcctgttcctgcctctatggccaatgccgtctcctcccccactcaacctgca
gccagtagcacagcagcacttagctccgtccttccggagatcaaagtaaagcaggaggcg
gagtctatggatgcatcacagccagctctttccatcccctcatcgacagccccagcctcc
gtcttctcctcccaggcctcaggcctcacagttccccatcagcctggagatcttctgcct
ggcgcctccccacgcaagaaaccacgcaaacagcagcatgttatctccaacgaggagggt
gagatgatggagaccaacagcacagatgaagagagggccaacaccagaactccagggagc
aaagcagagagaccagagtcacctcccagggaatatgtggatgaagagggtgtgcgatat
gtacctgtgcgccccagaccaccaatcacgctcctgcgtcattacagaaacccctggaaa
gctgcataccaccacttccagagatacaccgacatccgtgttaaagaggagaaaaagaat
tctctccaagacgtggccaatcagaggggggttgcatgccgtgcccagggctggaaggtg
cacttgtgtgctgcacagcttaagcagctgacaagcctagagcatgacgcgtacagccgc
ctcaccacactgcaggagggactcatctcaaagaagagagcaggagcagatgatgaccta
caccgcatcaacgagctcatccagggtaacatgcagcgctgcaagctagtgatggatcag
gtgactgaggcaagagacaccatgatgaaagttctggaccataaagacagagtcctcaag
ttactcaacaaaaacggcacagtcaagaagagctccaagttaaagcgcaaagagcggacc
tag
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integrated database retrieval system
