Ictalurus punctatus (channel catfish): 108272006
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Entry
108272006 CDS
T04658
Name
(RefSeq) rho GTPase-activating protein 15 isoform X1
KO
K20634
Rho GTPase-activating protein 9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108272006
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108272006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
WW
PH_9
SH3_1
PH_20
DUF2990
SH3_9
PH_11
SH3_2
Motif
Other DBs
NCBI-GeneID:
108272006
NCBI-ProteinID:
XP_017335547
Ensembl:
ENSIPUG00000024409
UniProt:
A0A2D0RYG6
LinkDB
All DBs
Position
11:8022892..8071458
Genome browser
AA seq
838 aa
AA seq
DB search
MLSGSWYRSMSSPTNSLPVGRGSLTPGLVVLEAQYDYSYRGADGRNISIHDGERFLLLKK
TNSDWWQVRRLGVGKKAKPLYVPATYVIEVPVNTLHSPQTSSQTASPKHSCLVAHRSHNP
YSQIQCSVPAKEFCRSMEDLNSNFAFKNSCIGKGAQGRHFTTSPISTTASPLGHLKVPAS
LIPRSKSSSHLPQNPYGELHISRPSPSSSPKSFSQWDVGSTTHKHTDGNIQTYSSQNSLT
DTQRKQSAEVPSPVPGQKPLQMLQLWEQYQDPESGRFYYVNSVTKERSWKPPRRARRSDH
IQNTASVTQPGTSPCDSSHLSLPLYNSGSTFLSRLSSDLTHNTQHANARQLSQTMLRAES
SDTLSSSSFTTDAQSTEGRDVITQSYSMMLPSQTARISSNGKSGYPMVEELPDSSLDTDG
MTPELEKAGLLNKTKIAEGGRKLRKNWNPSWVVLVGNSLMFFKDPKTQNSDGWKPGNSCP
ESSVDLRGAQLQWANELSSKKNVFKLRTVTGNEFLLQADTDSVIREWYCTIQKVIDRLDK
ENPLGNLLQYSLRRAGSLELLDHSGDEDENRTGHKPSLPRSISNLETSERKRVKSRLKKF
ILRRPPIQTLQEKGLIKDQVFGCSLELLCEREKNTVPRFVRNCTETVEKKGLETDGIYRV
SGNLAVIQKLRFAVNHERAVSTDGRYLFPEDLVPVEHVDLEDPQWEDIHVITGALKLFFR
ELPEPLVPYELFHDIVKAVKLSDYLDKVERMKSLVVSMPPTNHDTMRHMFRHLKRVMEHS
DTNRMTTQNIGIVFGPTLMRPQNDCANMAINMVYQNQAVELILSEYDQIFGSDPPGSL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaggcagctggtaccggagcatgagcagccccaccaacagccttccagtgggc
agggggtcattgacacctggtcttgtggttctggaagcccagtatgactactcataccgt
ggggcagatggacggaatatttccatacacgacggtgagcgttttcttttgctgaaaaag
acgaactctgactggtggcaggttcggaggctcggagttggcaagaaagccaagccactg
tatgtgcccgcgacctatgtcatcgaggttccagtaaacacattgcattcaccacagacc
agcagccaaacagcatcaccaaaacattcctgtctggtggctcaccgctcgcacaacccc
tactctcagatacagtgttcagtacctgctaaagaattctgtcgttccatggaggacctg
aacagtaactttgcttttaagaactcatgcataggaaaaggcgcacaaggaagacatttc
accacatcgcccatctctacaactgcctcacctttaggtcacctcaaggtcccggcgtct
ctgataccacgcagcaagagctccagtcacttgcctcagaacccgtacggggaactgcac
atcagcaggccgagtccctccagctcccctaagtccttcagccaatgggatgtgggaagc
accactcacaaacacacagacggaaacatccagacctacagctctcaaaattcattgaca
gacacgcagaggaagcaatcggcagaggtccctagcccagtcccaggccagaagcctttg
cagatgctgcagctgtgggagcagtatcaagaccctgaatctggtcgcttttactacgtc
aacagtgttaccaaggagcgttcatggaaaccaccacgtagagctcgccggagtgatcat
atccaaaacacggccagtgttacacagcctgggacttccccatgtgactccagccacctg
tcacttcccctttacaactcaggaagcacatttttgagcaggctctcctctgacctgacc
cacaatacccagcatgcaaatgcgcgacagctgagtcagaccatgctacgtgcagaatcg
tcagatacgctcagttcctcctcatttactactgatgcccagagcacagagggcagggat
gtcatcacccaatcatactccatgatgctgccttctcaaacagccaggatctcttcaaat
ggcaagtcagggtacccaatggtggaggagttgcctgacagctctctggacactgatgga
atgacaccggagcttgaaaaagcaggtctgctcaacaaaaccaagatagcagaaggaggt
cggaagctaaggaaaaactggaacccttcgtgggtggtgttggtggggaacagtcttatg
ttcttcaaagatcccaaaacccaaaattctgatggctggaaaccagggaacagctgtcca
gagagcagtgtggatctaagaggagctcagctgcagtgggccaatgagctttccagcaag
aagaatgtcttcaagttgaggactgttacaggaaatgaatttttattgcaagcagacact
gactctgtaattagagagtggtactgtacaatacagaaagtcattgacagacttgataag
gagaatcctctgggtaatctattgcagtattctttgaggagagcaggctccttggagttg
ttggaccatagtggagatgaagatgagaatcgtacaggacacaagccctcgctccctcgc
tccatctctaatttagagacttcggagcggaaacgagtgaagagtcgcttgaagaagttc
attctgaggagaccaccaattcagactttacaggaaaagggtcttatcaaagaccaggta
tttggctgtagtttggagttgctgtgtgagagggagaagaacaccgtgccacggtttgtc
agaaactgcaccgaaacggtggagaagaaaggtttagagacagatggtatctacagagtc
agtggaaatctggctgtaatccagaagctacgctttgctgtcaatcatgagcgagctgtg
tctacagatggacgttatctctttccagaggatttagtgccagtggagcatgtggacctg
gaagatccgcagtgggaggacatccatgtgataacaggagccctgaaactcttctttaga
gagcttcctgagccgcttgtaccttatgaactctttcatgacattgtcaaggctgtcaag
ctgtctgattacttggataaagtggaacggatgaaatcgctagtcgtcagcatgcctcct
acgaaccacgataccatgaggcacatgttccggcatcttaagcgggtgatggagcactca
gatactaatcgcatgacaacgcagaacatcgggattgtcttcgggccgacgctgatgcgt
ccgcagaacgactgcgcgaacatggccattaacatggtttatcagaaccaggcagtagaa
ctcatcctcagtgaatacgaccagatctttggatctgacccacccggatctctctga
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