Ictalurus punctatus (channel catfish): 108272038
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Entry
108272038 CDS
T04658
Name
(RefSeq) transcription factor AP-2 gamma isoform X1
KO
K09177
transcription factor AP-2 gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272038
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
108272038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
S-Me-THD_C
Motif
Other DBs
NCBI-GeneID:
108272038
NCBI-ProteinID:
XP_017335615
Ensembl:
ENSIPUG00000024691
UniProt:
W5U7C1
LinkDB
All DBs
Position
11:6599051..6612572
Genome browser
AA seq
447 aa
AA seq
DB search
MLWKLADNVKYEEDCEQERHDGSSNGNSRLPHHPVVSQPLYSPAPSLSHSTGSDFQPPYF
PPPYQPLPYTQPNDPYSHLSDPFNINSIHQSPTSNQQQPWPGRQNQDGIGPHARSGLATQ
ILGLESGSSSVRRDAFRRPELLPPHVHGLESAMGENMGLHEMGQGLDDVQHVDDHNIVTA
DQTVIKKGPVTHPKGNQIGVPFQRESLLGMVSNPTEVFCSVPGRLSLLSSTSKYKVTVAE
VQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTALV
EGEAVHLARDFGYVCETEFPAKAVAEYLGRPHVERNEINSRKNMLLAAKQICKEFTDLLT
QDRSPLGNSRPVPILDPGIQGCLTHFSLITHGFGSPAICAAMTSLQNYLNEALKQVDKMY
LNAAGDSSQGSSDGSSKAMDKMDKHRK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggaagttggcagataacgtgaagtacgaggaggattgtgagcaagagaggcat
gatggcagcagtaatggaaattcacggttaccgcatcatccagtggttagtcagcctctc
tacagtccggcgccttctctatcacactcaacaggctctgactttcagccgccatacttc
ccccctccctaccaaccactaccttacacccagccgaatgacccctactctcacctcagt
gacccattcaacatcaactctatccaccagtccccaacatctaatcagcaacagccgtgg
cccggccgtcaaaaccaagacgggattggaccgcatgcccgcagtggactcgccactcag
attctaggcttagaaagtggatcatccagtgttcggagagatgcctttcggcggccagag
ttgctacctccacatgtccatggacttgagtcagcaatgggcgagaacatgggattgcat
gaaatggggcaaggactcgatgatgtccaacatgtggatgatcacaatattgtaactgct
gaccagaccgtcatcaaaaaaggtccagtgactcatcctaagggcaaccagataggtgtt
cccttccagagggagtccctgcttggtatggtgtccaatcccacagaagtgttctgttct
gtgcctggccgcctctctctgctcagctccacctctaagtacaaagtgactgtagccgag
gttcagagacgcctatccccgcctgagtgtctcaatgcctctttgctgggtggggtccta
cgcagggctaaatctaagaatggtgggagatcactcagagagaagttggataagattggg
ttgaacttaccagcaggtcggaggaaggcggctaacgtcactcttctaacagcgcttgta
gaaggtgaggctgtacacctggcccgagactttggttatgtctgtgagacagagtttccc
gctaaggcagtggctgaatatctgggaagaccccatgttgaacgcaacgagatcaactct
cgcaagaacatgcttctggctgccaagcaaatctgcaaggagttcacagacctcctgaca
caggatcgcagtccactgggcaactcacggccggttcccatcctggacccaggcatccaa
ggctgtttgacccacttcagcctcatcacacatggctttggctcaccagccatttgcgct
gccatgacctcgctgcagaactacctcaacgaggctctgaagcaggtggacaaaatgtac
cttaatgcagctggagactcctcacaaggctcctcagatggaagcagcaaagctatggac
aagatggacaagcataggaagtga
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