Ictalurus punctatus (channel catfish): 108272052
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Entry
108272052 CDS
T04658
Name
(RefSeq) claudin-10 isoform X1
KO
K06087
claudin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu04382
Cornified envelope formation
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108272052
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108272052
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108272052
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108272052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108272052
04147 Exosome [BR:
ipu04147
]
108272052
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108272052
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108272052
Exosomal proteins of colorectal cancer cells
108272052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
TM225
Claudin_2
DUF6057
Motif
Other DBs
NCBI-GeneID:
108272052
NCBI-ProteinID:
XP_053536819
Ensembl:
ENSIPUG00000003064
UniProt:
A0A9F7TGW8
LinkDB
All DBs
Position
6:complement(9616920..9643070)
Genome browser
AA seq
402 aa
AA seq
DB search
MGKMITEISAFLVATAGWVLVSSTLPTDYWKVSSNDGTVITTATFWCNLWKICVTDSTGV
SNCKDFPSMLALDGYIQVCRGLMISAVCLGFFATACALVGMKCTKIGGSDQLKSRLACFS
GVQYFIAGMNWGQPCSLVGRDRPCAFWEGLCSFHHCLMASAKVSCTVGMDYWRISYIGGQ
GGSWIIKAAWYWSTLWRECYIDSSNVANCRDYDTMWVVRPASRTEQGPIQAVRALLIVGM
FLGLFAAIFSFIGMDCTYIGGREKSKYKILVLGTVLHFAGGVTCLAAYCLYTSRLGTVVF
TRMHDARLLRYYIGLPVFFGLVGSPCIILGSVLYAVTLYSVLTANRKTDVYASRKYMAPK
IYKAQKKGRTSHNRDDASRSSSESSSQVSRTSLILADRDTFV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaatgataacagaaatatcagcatttcttgtagctacagcaggctgggtgctg
gtgtcttccactttaccaacagactactggaaggtgtcttcaaatgatggcacagtaatt
actacagccaccttctggtgcaacctctggaagatttgtgtgaccgattctactggcgtt
tccaactgcaaagactttccttccatgcttgccttagacggttatatccaggtgtgcaga
ggactgatgatctcagctgtgtgtcttggtttctttgcaactgcctgcgctctggtggga
atgaagtgtaccaaaatcggaggaagtgatcaactcaaatcccggcttgcatgcttttct
ggagttcagtattttatcgctggtatgaattgggggcagccctgttcattggttgggcgg
gatcggccctgtgcattctgggagggattgtgttcttttcatcactgtttgatggcttca
gcaaaagtgtcctgcacggtgggaatggactattggagaattagctacataggtggacaa
ggaggctcctggatcattaaggctgcatggtactggtccaccctttggagagaatgctat
atagattccagcaatgtggccaactgcagggattatgacaccatgtgggttgtgaggcct
gcatctaggacagaacagggaccaatacaggccgtgagggctttgttaattgttgggatg
tttctgggacttttcgccgccatatttagctttattgggatggactgcacatatattggt
ggacgggagaaatccaagtacaaaatattagtactaggaactgttcttcattttgctgga
ggtgtgacttgccttgctgcttattgcttatacacaagcagactgggcacagtagtattt
acacgcatgcatgatgcacgcctcctaaggtattacataggtcttccagtattctttggt
ttggtaggcagtccttgcataatcctgggctctgttctgtatgctgtgactctctacagc
gtcctcacagcaaatagaaagacagatgtttatgcttcaagaaaatacatggctcctaag
atatacaaggcacagaagaaaggtcgaacatcacacaacagagacgatgcatctaggtcc
tccagcgaatcgagtagccaagtgtcgagaacttctttaattctagctgacagagatact
tttgtttga
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integrated database retrieval system
