Ictalurus punctatus (channel catfish): 108272135
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Entry
108272135 CDS
T04658
Name
(RefSeq) TBC1 domain family member 24
KO
K21841
TBC1 domain family member 24
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108272135
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108272135
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108272135
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108272135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLD
RabGAP-TBC
RabGap-TBC_2
DUF7168
Phage_connector
Motif
Other DBs
NCBI-GeneID:
108272135
NCBI-ProteinID:
XP_017335877
Ensembl:
ENSIPUG00000004669
UniProt:
A0A2D0RZF5
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All DBs
Position
1:complement(38413539..38426048)
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AA seq
579 aa
AA seq
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MGEDFGAFVDWSLMGDVSRDATPGKTEYTDTKERKRHARSGQWVKSHSQRAQVYRRLIKA
LPCRSVTPDAGVYRAAKEKHTKRDSTTDVKLKNGDMLAVDLPEFASGAPVPRYCLKRESA
TSVGSVLQSLASEFPDVSYCPLLPAVTALLLHWSSDEAQCFEGVARLLATTQQQRMLHQT
FLAHRAACMTFGDLARKHCPAAHVHIVSLATEKKEDVAEVYGDWQRWVFGDLPFSHAARV
MDVFLVEGFKVLYRVALALLKLYRKQKLDKRTSRKDSDGVRGDVREFVKGIASSVSPDKL
MEKAFAIRLFSRKEINLLQLANEKALQQKGITVQQKRCNVDLTVNVDGFCSDIISVKEIR
DVWSWIPERFALCQPHLLFSTSTHGCSLNRFYSHCEGHEPTLLLIKTTDGEVCGAFLSTD
WEERKRGGSTLSFFGTGECFVFKMKPEIERYEWVIIKHPELASSASDRAADANAANSDEN
IHSLPVEAPPNSSSDSTHLSPFLAARHFHLNARNTSMFMAGNFDSIIIGGGEGNALYIDA
ELNHGRTGCCTTFDNPPLCSENFQIAVLEVWGFQDAMAT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggactttggggctttcgtggactggtcgctgatgggggatgtgtcccgtgat
gccacaccgggaaaaactgaatacacagacactaaagagcgtaagcgccacgcccgctcg
ggtcagtgggtgaagagccactcgcagcgagcgcaggtgtaccggcgcctcatcaaagcg
ctgccatgccgctctgtcacgcctgacgccggcgtctaccgcgctgcaaaggagaaacac
accaaacgggacagcactacagacgtgaaactgaagaacggtgacatgttggctgtagat
ttgcccgagtttgcgtctggagctccggttccacgttactgtttaaagcgtgagtctgcg
acttcagtgggctccgtgttacagagtttagcgtctgaatttccagacgtgtcctattgc
cccttgttacccgccgtcactgcgctgctgcttcactggagctcggatgaggctcagtgc
tttgaaggcgtggctcgattgttagcgacaacgcaacagcagcgcatgctacaccaaacc
ttcctggctcaccgcgctgcctgcatgacctttggcgacctggcacgcaagcactgccct
gctgctcatgtgcacattgtttccttggcaaccgaaaagaaggaagacgtggcggaggtg
tacggagactggcagcgctgggtgttcggcgatctcccgttctcccacgccgcccgggtc
atggacgtcttcctggtggaaggctttaaagtgctgtaccgagtggcgctcgccctgctc
aagctctacaggaagcagaaactggacaagaggacgagcaggaaggactcggacggggtc
agaggggacgtgcgagagtttgtgaagggtatcgcgagcagcgtgagtccagataagctg
atggagaaagcgttcgctataaggctcttcagcagaaaggagatcaacctgctgcagctg
gctaatgagaaagctctccagcagaagggcatcaccgtccaacagaagaggtgtaatgtg
gacctgacggtgaatgtggacggtttctgctctgacatcatcagtgtgaaggagatcagg
gacgtgtggtcatggattcctgaacgatttgctctgtgtcagccccatctgctgttcagc
acctccacacacggctgcagcctcaaccggttttattcacactgtgaaggacatgaaccc
actctactgctgatcaagactactgacggagaggtgtgtggtgcgttcctatccacagac
tgggaagagaggaagcgaggaggaagcacactgagcttcttcgggacaggcgagtgtttc
gtctttaagatgaagcctgagatagagcgttatgagtgggtcatcattaaacatccggag
ttggccagctctgcgtctgatcgtgcagctgatgctaacgctgcaaactctgatgagaac
atacactcactccccgtggaggctccgcccaactccagcagtgactccacccacctctcg
ccgttccttgccgcccgacactttcacctgaatgctcgtaacacatccatgtttatggcg
ggaaactttgactctatcatcatcggaggtggtgaggggaacgcgctgtatatcgacgca
gagctgaatcacggccggacgggttgttgcaccaccttcgacaatccaccgctgtgttcc
gagaacttccagatcgccgtgctcgaggtctggggcttccaggacgccatggcaacctaa
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