Ictalurus punctatus (channel catfish): 108272136
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Entry
108272136 CDS
T04658
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108272136
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
108272136
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PH
RhoGEF
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
108272136
NCBI-ProteinID:
XP_017335835
UniProt:
A0A2D0S0U7
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All DBs
Position
11:complement(13481477..13499997)
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AA seq
1366 aa
AA seq
DB search
MSAELREQYMNPKTQIQAQCLPNGQFGLTVPGKCCQNQGCKPPLFSKARSNPTQGQSFNN
YLKRHINKNLRTANSEQHVLKNYRKEVWTPWEESRLTEDVEQKPWKDIKCKEGSMQWEAL
AQADQEEQDDILEQLGCGEELAQENGLDWQVGLEQREGFNLCEGQGSVKLLSDSYSKAKE
DMQGMEGQLDIEDERKEEGVNSKKRSLMTPVDSMLSSTYSFHKQIVHKDGINQNKTLTPV
MLSDKTYTNDLFTDQKFLNGIYPNNIYINGLNTDALTSDRTDIVTMFPEVFDAGEALADA
DGFSECDLLEHIVPSWKSGVEDVGDCGDTVMPPVEEDSEILSGSLCTFGEEGSEAVEEQE
QKEQVKNLSLYKNSHSDPTVYPKSEREAEILSEFSDYCFSSLCSSESEVTSDEVERTETK
QNHENAQDGPESEQAVSSEFKAGNCSITSIPSVSSVVSLQPEEQTSQQMQEDHHDVQEVE
GEDILCSKTVMGTKLLEEHVYEETEPKFHSKDFLQSRKYLMTRSISVETPRLDPLSTTIS
GKGRLMLHPQTYYTRHNCLGDSLPVLTGSLGCLSPGSPCPPAMDIPPPFELSSITRRPIR
KSTPALPNDVTACNRKLDFGLKRYFLPLRFLRKTERRTDSRSVSSRSSSESSPQGSCRRL
NLIRQCTESPELHRAHDSSVPSSPSSVRLHKNMHRPGVSTPLNNNFGSASPNSWDMVRVE
SDNLIHSLFLQPFPLSKPRSFSSPNVDSSIYENVLNTSPHYENVQVRLLSPSNQSQRNQS
SANDTDGYVDMSSLSSFQSKSSANEQETESAYTICSPMVRSDGTVSVSVGVVCTKEEEKK
APERLTVNCSRAFYTVKELLDSEAQHVNTLNLLNETLGADEQLMKLWSDLPAVSSLHQDL
HTQLECRIKEWDQKEGISDILLAKKAEFSVFSSFISQHDSKVMTMEQMENTQLDISALKQ
QLLQVIARVLQYRMLLTDYKNNLSLVSREYEDTQAALLMVSDIADQAKDSLKNGADLMRL
VNIEHNVQGLKNLLQPGRVFVKEGTLMKVSRKCKQPRHLFLMSDIMLYTYPQQDGKYRLI
NTLALTGMEVTRHLIENTQNALKIQVKDISITLLASSSIERDNWFVTLNRTVADLGSLLI
EPPGCFEVGEKSGVCLGENAPPLVSVSQVAVCMNCPVHFSLTHRRHHCHACGKVVCRDCC
RNKVPLKYMKNRRAKVCDKCYSELCKNESDVAMLMESSSRPLSAVFQNIHPASLWRSRKG
HLSFNQVTGSDGEMSGTLQRSRNSKRSWKSLWFLLKDKVLYTYPQPEERVACESLPLLGF
SVKSESEGVSSVFQLYHNTTLYYTFKAQDTHTAQRWVSAMEEATVL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaattacgggagcagtacatgaatcccaaaacccagatccaagcccagtgt
cttcccaatgggcaatttggtctaacagttcctggaaaatgctgccagaatcagggatgt
aaaccacctcttttctccaaagcaaggtcaaacccaacacagggtcaaagttttaataat
tatctgaagagacacattaacaaaaacctaaggactgctaattcagaacagcacgtactg
aaaaactataggaaggaagtatggacaccgtgggaggaatcacgactgactgaggatgtg
gaacaaaaaccatggaaagacataaaatgtaaagaggggtctatgcaatgggaggcgctt
gcacaagcagatcaggaagaacaagacgacatactagaacagttgggctgtggggaggag
ctggcacaggagaatgggctagattggcaggtgggtttagaacagagggagggatttaac
ttatgtgaaggacaaggctcagtgaaacttctctctgactcctacagtaaagcaaaggag
gatatgcaaggcatggagggacagctagatatagaagatgaaaggaaggaagagggtgtg
aatagtaaaaaaagatcacttatgacacctgttgattccatgctctcatctacatactca
tttcataagcaaatagtgcacaaagatggaataaaccaaaacaaaactctaacaccagta
atgttgtctgacaaaacatatactaatgacctgttcactgatcaaaaatttctaaatgga
atttatccaaataatatttacataaatggactcaacacagatgctttgacatcagaccga
accgacatagtcaccatgttcccagaggtgtttgatgcaggtgaggcattggcagatgct
gatggcttttcagagtgtgatctcttagaacatattgtaccctcttggaagtcaggggtt
gaagatgtgggtgactgtggagatacagtaatgccgcctgtggaagaggactcagagatc
ttgagtggatcattatgtacttttggggaggagggcagtgaagcggtagaggaacaggaa
caaaaggagcaggtgaaaaacctttcattgtacaaaaattctcattcagatccaacagtt
tatccaaaatctgaacgagaagctgaaatactctctgagttttctgattattgcttctct
tcattatgctcatctgagtctgaggtgacctcagatgaagtagaaagaactgagaccaaa
caaaatcatgaaaatgctcaggatgggccagaatctgaacaagctgtatcatctgagttc
aaagcaggtaactgcagtataacttctataccaagtgtctcctccgttgtttctctacaa
cctgaagagcaaacgtcacagcagatgcaagaggaccatcatgatgttcaagaggtagaa
ggagaagacattctatgtagtaagactgttatgggaacaaagctgttagaagagcatgtg
tatgaagaaactgagccaaagttccattccaaagactttttgcagagcaggaaatattta
atgactcgctccatatctgtggaaacccccagactggatccattgagtaccacaatatca
ggaaaaggacgtttaatgctacacccacagacgtactacacacgacataattgtcttgga
gatagtttgcctgttttgactggttcattaggatgtctctcaccaggaagtccttgccct
cctgctatggacataccacctccttttgagctgtcttccatcacaagacgaccaatccga
aagagtacacctgctctgccaaatgatgtgacggcctgcaataggaaacttgattttggc
cttaaacgttacttcttacctttacggtttctgaggaaaactgaaagaaggacagatagt
cgctcagtgtcatcaaggtcctcttcagaatcaagtccacagggctcttgccggaggtta
aatttaataaggcaatgtacagaaagccctgagcttcacagggcacatgacagttcagta
ccatcatccccatcttctgttcgtttacacaagaacatgcacaggccaggtgtaagcaca
cctttgaataacaattttgggtcagctagtcccaactcatgggatatggtaagagtggag
tcagataatttgatccactccctttttctacaacccttccccctttccaaacctcggtct
ttctcttcccccaatgtggactcatcaatttatgagaatgttctaaacacaagtccccac
tatgaaaatgtgcaggtccgcctcttatcaccctccaatcagagtcaacgaaaccagagt
tcagccaatgacactgatggttacgtggatatgagcagcctatcaagctttcagagcaaa
agctcagcaaacgagcaagagactgagagtgcttacacaatctgctctcctatggtgagg
tcagatggaacagtgagtgtatctgtaggtgtagtctgcacaaaagaggaggagaaaaaa
gcacccgaaagactgactgttaattgttctagagcattttacactgtgaaagagctgctg
gacagtgaggcacagcatgtaaacactttaaaccttctaaatgagactttaggtgcagat
gagcagctgatgaaactttggagtgatttacccgcagtttcttcactccaccaagacctc
cacactcaactggaatgccgaattaaagagtgggatcagaaggaaggcatttctgacatt
ctcttggccaagaaagcagagttttcagttttctcttcctttattagccagcatgactcc
aaagtgatgactatggagcagatggagaacacacagctggacatcagcgctctcaaacag
cagttgctgcaagtgatagcacgagtcctacaataccgcatgcttctaacagattataaa
aataatctctcactagtctccagagagtatgaggatacacaagctgctctgttgatggtc
tcggatatagctgatcaggcaaaggacagcctcaagaatggagcagatctcatgcgtctg
gtcaatatcgagcacaatgttcaaggactaaagaacctgcttcagcccgggagggtgttt
gtgaaggagggaaccctgatgaaggtcagcaggaagtgcaaacagccacgtcatctattc
ttgatgagtgatataatgctttacacttacccccaacaagatggcaaatacagactcatt
aacactttagcactgacagggatggaggttactagacatttgattgaaaatactcagaat
gccttgaagattcaggtgaaagacattagtatcacacttttagcaagctcttctattgag
agggataattggtttgttacgctgaatcggacagtagctgaccttggctcactattgatt
gaaccccctggctgttttgaggttggggagaagtcaggggtatgtctcggggagaacgcg
ccacctctggtctccgtttcccaggtagcagtgtgtatgaactgccctgtccatttcagc
ctaacacaccgaagacatcactgccatgcctgtggaaaggttgtgtgcagagactgctgc
aggaacaaagtccccctgaaatacatgaagaacagacgagccaaagtgtgtgataagtgt
tacagtgagctttgcaagaatgaaagtgatgttgctatgctaatggaaagctccagtcgg
ccactgtctgccgttttccagaacattcacccagccagtctgtggaggagccgcaaaggc
cacttatccttcaaccaggtaacaggatcagatggtgagatgagtgggactctgcagagg
agtcgaaatagtaagcgaagctggaagagtctgtggtttcttcttaaagataaagtgctt
tatacatatccacagcctgaggagagggttgcatgtgagtcccttcctcttctaggtttc
tcagtaaagtctgagagtgaaggagtgagcagtgtgtttcagctctaccacaacactaca
ctctattacacattcaaggctcaggatacacacacagcacagaggtgggtgagtgccatg
gaagaggccacggtcctatag
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