Ictalurus punctatus (channel catfish): 108272152
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Entry
108272152 CDS
T04658
Symbol
lrrc8c
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C isoform X1
KO
K22038
volume-regulated anion channel
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108272152 (lrrc8c)
Ion channels [BR:
ipu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
108272152 (lrrc8c)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_9
LRR_R13L1-DRL21
LRR_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108272152
NCBI-ProteinID:
XP_017335868
Ensembl:
ENSIPUG00000012704
UniProt:
A0A2D0RZD9
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All DBs
Position
11:15852550..15864477
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AA seq
804 aa
AA seq
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MKMIPVTEFRQFTEQQPAFRVLKPWWDVFAEYLSVVMLMIGVFGCTLQVMQDKIICLPQR
VYAPNQTVPSLNQTELTRDPNNSSVPPISPVPVSYEMKGLKTNLDLQQYSFVNQLCYEKA
LHWYAKYFPYLVLIHTLVFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVS
GESPEEKDHKKNSASRSNLNTSTGEGNLEKTQSLRSIPERIVVDKPTASALDKKEGEQAK
ALFEKVKKFRLHVEEGDLLYLMYVRQTVIKVIKFVLIVAYNSVLVSKVRITVQCEADVEN
MTGYRKFLCNHTMAHLFSKLCYCYLCFVIVYGLTCLYTSYWLFYRSLKEYSFEYVRQETG
IDDIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTVDKLRQKLQ
TNASDRLELQLFMLAGLPDTVFEVTELQSLKLEIINNVTIPAAISQLEDLQELSLHQCIL
KIHTGALAFLKENLKVLRVKFDDHRELPLWLYSLRNMEELQLIGSLSPDASKNITLDSLR
DLKSLKTLTLKSNLTKIPQSVVDVSSHLQRLYVQNDGTKLVMLNNLKKMVHLMELELVHC
DLERIPHAIFSLTQLQELDLKENSLRSVEEIISFQHLRKLTCLKLWHNAITHIPEHIKKL
GSLERLYFSHNKIEILPSHLFLCNKLRHLDLSYNDISFIPPEVGVLQSLQYFSLSSNKIE
NLPDELFFCKKLKTLKLGRNMLSVLSPKISYLASLTYLELKGNHFEVLPAELGCCQALKR
SGLVVEDTLFDTLPSEVRDTMKAE
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattccggtcacagaattccgtcagttcacggaacagcagccggcattccga
gtcctaaaaccatggtgggatgtcttcgccgaatatctctccgtggtcatgctcatgatt
ggtgtgtttggttgcacgctgcaggtaatgcaggacaaaatcatatgtcttcctcaaagg
gtgtatgccccaaaccaaacagtgccttcactgaaccagacggagctcacaagggatccg
aacaattcctctgttccacctatctccccggtgcctgtatcctatgagatgaagggactc
aaaaccaacttggatctgcaacagtacagctttgttaaccaactgtgctatgaaaaagct
ctgcattggtatgccaagtattttccttacctggtgctcatacatacccttgtattcatg
gtgtgcagtaatttctggttcaagttccctggctcaagctcaaaaattgaacacttcatc
tccatattgggcaaatgttttgattctccatggactacgagggctctgtccgaggtgtca
ggagagagtccggaggagaaagaccacaaaaagaacagtgccagtagatcaaaccttaat
acctccaccggggagggtaatctggagaaaacccagtcgctgagatctattcctgaaagg
attgtagtggacaaaccaacagcgagtgcacttgacaagaaggaaggagagcaagccaaa
gcgttgtttgagaaggtaaaaaagttccgacttcacgtggaggaaggcgatttattgtat
ctcatgtatgttcgtcagactgttattaaagtgatcaagtttgttcttattgttgcctac
aacagtgttctggtgtcaaaagttagaattacagttcagtgtgaagcagatgtagagaat
atgactggctacagaaaatttttgtgcaatcacaccatggcccatcttttctccaagctc
tgctactgctatttgtgttttgtaatcgtttatggattaacgtgcctttatacatcatac
tggcttttctaccgttccctgaaagagtactcttttgaatacgtgcggcaggagactgga
attgatgacatcccggatgtgaaaaatgattttgctttcatgttgcacatgattgaccaa
tatgatccactgtattccaagaggtttgcagtgtttctgtctgaggtgagtgaaaacaag
ctaaaacaactcaatctgaaccatgagtggaccgtagataaacttcgccaaaagctacag
accaatgccagcgaccgactggagcttcaactcttcatgctcgcagggcttccagatacg
gtcttcgaggtcaccgagctgcaatccttgaaattggagattattaataatgtcaccatc
cctgcagccatttctcagctggaagatcttcaggagctttctctgcaccagtgcatcctc
aaaatccacacaggggccctcgctttcctgaaggaaaaccttaaggttctgcgtgtgaag
tttgatgaccaccgtgagcttcctctgtggctctacagtctgcgaaacatggaggaactt
caactaattggatctctgagtccagatgcgtcaaagaacataaccctggactctctacgt
gacctcaagtcccttaagaccttgacactcaaaagcaaccttacgaagatcccccagtca
gtcgtggacgtgtccagccacctgcagcgtctgtatgtgcaaaacgatggcaccaagctg
gtcatgctgaacaacctgaaaaaaatggtgcatcttatggagcttgagctggttcattgt
gaccttgaacgcattccacatgccatcttcagtctgacccagctacaggagctggacctt
aaagagaacagcttgcgctctgttgaggagatcatcagtttccagcacctccggaaactc
acatgcctaaagctgtggcacaatgccatcactcacatccctgagcatatcaagaaactg
ggcagtctggagcgtctctattttagccacaataagattgagattttgccttcacacctg
tttctgtgcaacaagctacgccatcttgacctttcctacaatgatatcagcttcattcct
ccagaagtaggtgttctccagagccttcagtacttctccctctctagcaacaaaatcgag
aacctcccagatgaacttttcttctgcaagaagctgaagaccctcaagctcgggaggaac
atgctctcagtgctctcaccaaagatttcctacctggcttcactgacttatttagagtta
aagggcaatcattttgaagttttgccagctgagcttggctgctgtcaagccttgaagcgc
agtggccttgtggtagaagacaccctgtttgacacactgccttcagaagtcagggatacc
atgaaagctgagtga
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