Ictalurus punctatus (channel catfish): 108272218
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Entry
108272218 CDS
T04658
Symbol
krt18b
Name
(RefSeq) keratin, type I cytoskeletal 18b
KO
K07604
type I keratin, acidic
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108272218 (krt18b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108272218 (krt18b)
04147 Exosome [BR:
ipu04147
]
108272218 (krt18b)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108272218 (krt18b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108272218 (krt18b)
Exosomal proteins of other body fluids (saliva and urine)
108272218 (krt18b)
Exosomal proteins of colorectal cancer cells
108272218 (krt18b)
Exosomal proteins of melanoma cells
108272218 (krt18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Plectin_PPL
TBCA_PH
GAS
CCDC39
GapR_DNA-bd
APG6_N
YabA
TPR_MLP1_2
Serglycin
Hmw_CFAP97
DUF7605
Motif
Other DBs
NCBI-GeneID:
108272218
NCBI-ProteinID:
XP_017336002
Ensembl:
ENSIPUG00000020060
UniProt:
A0A2D0RZT6
LinkDB
All DBs
Position
11:complement(27999557..28005559)
Genome browser
AA seq
399 aa
AA seq
DB search
MSVRSSYSHFTRSAPVSYRATSIYGGAGGTGSRISSASAYGSLRSAPPGSSISSSTAFKV
SSGLGAGAGSGAGFGSGHVMGDEKGQMQNLNDRLASYLETVRRLEKENSKLEQKIRQAME
KAGPDARDYSKYNAILDDLRRKIFDATMENGRYVLHIDNARLAADDFRVKYENELSIRQS
VEADIAGLKKVIDDTNVNRMNLESELEALKEELLFLKKNHDDEVADLRSQITQSGVQVDV
DAPKGQDLSQVMEEMRANYEKLAMKNAEELKMWHENQIADVQAQVSQNTEALQGAQMETN
DLRRQIQTLEIELASQQSLKASLEDTLRNTELRFNVEMEKCNSIIMQLEAELGQLRAKIT
EQGQEYQTLLNMKMKLEAEIATYKTLLDGEDLKLQDALD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccgctcttcttactcacacttcacccgctccgcacccgtgtcgtaccgcgcc
accagcatctatggaggagcaggaggcactggcagccggatctcctcggcctcggcctac
ggcagcctgcgttctgcaccgcccggctcgtccatctcctcctccaccgcctttaaagtg
agttcaggcctcggtgcaggagctggaagcggagcgggcttcggctctggacacgtcatg
ggagacgagaagggtcagatgcagaacctgaacgatcgtctggcgtcgtacctggagacg
gtgcgcaggctggagaaagaaaacagcaagctggagcagaagatcagacaggccatggag
aaagctggacctgatgcccgcgactacagcaagtacaatgccatcctggacgatctgaga
agaaagatattcgatgccacgatggagaacggccgttatgttctgcacatcgacaacgct
cgtctggctgcagacgatttcagagtcaagtacgagaacgagctgtccatcaggcagtct
gtggaggcggatatcgcaggcttgaagaaagtcatcgacgacactaacgtcaatcgcatg
aacctcgagagcgagctggaggccttgaaagaggagcttctgttcctcaagaagaaccat
gatgatgaagtcgcagatctgcgtagtcagattacgcagtctggcgttcaggtggacgta
gatgccccgaagggacaagacctgtctcaggtcatggaggaaatgagagctaattatgag
aaactggcgatgaagaacgctgaagaactcaaaatgtggcatgaaaaccagatagcggat
gtccaggctcaagtgtcgcagaacacagaagcgttgcagggagctcagatggagacgaac
gacctgagaagacaaattcagacgctagagatcgagctagcatcgcagcaaagcctgaaa
gcatcactggaggacacgttgaggaacactgagctccgcttcaacgttgagatggagaaa
tgtaacagcatcatcatgcagctggaggcggaactggggcagctcagggcaaagatcaca
gagcaggggcaggagtaccagactctactcaacatgaagatgaaactcgaggcagaaatc
gccacctacaaaaccctgctggatggagaagatttaaaactgcaggatgctctggattaa
DBGET
integrated database retrieval system
