Ictalurus punctatus (channel catfish): 108272279
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Entry
108272279 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108272279
04082 Neuroactive ligand signaling
108272279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108272279
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108272279
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
RDD
Motif
Other DBs
NCBI-GeneID:
108272279
NCBI-ProteinID:
XP_017336087
Ensembl:
ENSIPUG00000022110
UniProt:
A0A2D0S022
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All DBs
Position
11:complement(26641580..26783703)
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AA seq
447 aa
AA seq
DB search
MSAKFLLHVVLLSVLHACSQTVASEDEEYDDVTVSQMLSPKKNEMDATQILNNLLKEYDK
KLRPDIGVKPTVIDVDIFINSIGPVSSINMEYQIDIIFAQTWTDSRLRYNSTMKILTLNS
NMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPM
DEHSCPLIFSSYGYPRDEMIYKWRKNSVEAADQKSWRLYQFDFMGLRNTTDVLKTTSGDY
VVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLS
TVARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSYSVRRPTCNKTKRPNYSVL
DVGPPPTVIALNNSMYWQEFDDACLYECLDGKDCQSFFCCYEECKGGAWRKGRVHIDILE
LDAYSRVFFPTSFLLFNVVYWVGYLYL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaattcctgctccatgtcgtacttctgtccgtgttgcatgcatgttctcaa
accgtcgcgtctgaagatgaggagtacgacgatgtgaccgtcagtcaaatgctgtcgccg
aaaaagaacgagatggacgccactcagatcctgaacaacctcctgaaggagtacgataag
aaactccgccctgacatcggagttaaaccgaccgtcatcgacgtggatatcttcattaac
agcatcggacccgtctcgtctataaacatggagtatcagatcgacatcatctttgcccag
acgtggacagacagtcggctcagatacaacagcaccatgaaaatattaactttaaacagt
aatatggtgggactgatttggctcccagacacaatcttcagaaactccaagaacgcagac
tcgcattggattacaacacccaatcagctgctcaggatatggaacgatgggaaaatactt
tatactctcaggctgactataaacgctgagtgtcagctgcagctccataacttccccatg
gatgaacactcctgcccactcatcttctccagctacggatatccacgagatgaaatgatc
tacaagtggaggaagaactcggtggaagcggccgatcagaagtcctggagactttatcag
tttgacttcatggggctgaggaacaccacggacgtcctgaagaccacgtcaggtgactac
gtggtgatgacggtttattttgacctgagcagaaggatgggctactttaccatccagacc
tacatcccctgcatcctgaccgtcgtgctctcctgggtctccttctggattaagaaagat
gcaacgccagccagaactgctttaggaataaccacagtgttaaccatgaccacgctgagc
acagtggccaggacgtcgttacccagagtctcatacgtcaccgccatggacctcttcgtg
accgtctgctttctctttgtctttgcggctctcatggagtacgcgacgctcaactattac
tcgtacagtgttcgcaggccgacctgtaacaagacgaaaagaccgaactactcagtgctg
gacgtgggacctcctcctacagtcatcgctctgaacaactccatgtactggcaggaattt
gatgacgcctgtctgtatgagtgcctggatggaaaagactgccagagcttcttctgctgc
tatgaggaatgcaagggcggggcctggagaaagggcagagtccacatagacatcttggaa
ctggacgcatactcacgtgtcttctttcccacctctttcttgttgtttaatgtggtctac
tgggtaggctacctctatctttag
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