Ictalurus punctatus (channel catfish): 108272353
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Entry
108272353 CDS
T04658
Symbol
pals2b
Name
(RefSeq) MAGUK p55 subfamily member 6b isoform X4
KO
K24048
MAGUK p55 subfamily member 2/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108272353 (pals2b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
PDZ domain-containing proteins
MAGUK family proteins
108272353 (pals2b)
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
SH3_1
SH3_2
PDZ_2
PDZ_6
PDZ_Tricorn
SH3_9
Motif
Other DBs
NCBI-GeneID:
108272353
NCBI-ProteinID:
XP_017336212
Ensembl:
ENSIPUG00000006330
UniProt:
A0A2D0S0F6
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All DBs
Position
12:complement(17854567..17886073)
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AA seq
549 aa
AA seq
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MNRTRRRHMRTRTALLHLFKSTARRKDLRGNSTKPAMQQVFGNLRDLPKSTKASDLDLIF
LRGIMESPVVCSLTKVHEHLEDMKLEAVQDNNLELVSEILGVIRGLTIRDDSATELLRIL
QQPHFQSLLEAHDMVASKCHEAPPPVDPAIEAAVNNALLQGDAVRMIGIHKKAGEPLGVT
FRVEKDDLVIARILYGGMIDRQGLLHVGDIIKEVNGQEVGNNPTELQEILKECSGGITLK
ILPSYIDSAVPPQVYVKPHFDYNPANDTLIPCREAGLAFKRGDILQIVNREDLNWWQACH
HVGGATGLIPSQFLEEKRKAFVPKDLDRTGILCGTVNGKMKKKKMYLTSRNAEFDSHELQ
IYEEVACMPPFQRRTLVLIGAQGVGRRSLKNRLLVLHPDRYGTPVPFTSRRPREDEHNGQ
TYQFVPRMDMEMDIKLGCFLEHGEYDGNLYGTKISSIHEVVNTGRTCILDINPQALKVLR
TAEFMPYVVFIAAPEFETLKAMHKAVCDAGFTTKQLTVCPVRLIEAIMNIRELSMGSKQP
ILKLRKEET
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggacgcggcggagacacatgcgcacgcgcactgcgttactacatctcttcaaa
tcaactgcaaggcgcaaagacctgaggggtaattccacgaaacccgctatgcaacaagtg
tttggtaacctgagggacttgccgaaatccaccaaggccagtgacctcgacctcatcttt
ctcagaggcatcatggaaagccctgttgtctgctctctcaccaaggttcacgagcattta
gaggatatgaagttggaggcagtacaggacaataatcttgaactagtgagtgagattcta
ggggtaattcgtgggctgaccattagagatgacagtgctacagagctattgagaattctt
cagcagcctcacttccagtctctcctggaggcccatgatatggtggcatcaaaatgccat
gaggctccaccccctgtcgatcctgccattgaagcagcagtcaacaatgcactcctgcaa
ggtgatgctgtcaggatgatcggcatccacaaaaaagccggagaacctctgggagtcaca
ttccgggtagagaaggatgacctggtgattgctcggattctctatggtgggatgattgac
aggcagggcctgctccatgtaggtgatatcataaaggaagtgaatggacaagaagtgggc
aacaaccccacggagctacaggagatactgaaagagtgtagtggaggaatcacgcttaaa
atcctgccaagctacatagattcggcagtaccaccacaggtttatgtaaagccacatttc
gactacaatccagccaatgacactctgattccgtgcagagaggccgggctcgccttcaag
aggggtgatattcttcagatagtcaacagagaggacctgaactggtggcaggcatgtcat
catgtgggaggggctacagggttaattcccagtcagtttctggaggagaaaaggaaagct
tttgtccctaaggacttggatagaacaggaatcttatgtggaacagtgaatggtaaaatg
aagaaaaaaaagatgtacctcacttcgaggaatgcagaatttgacagtcacgagctgcag
atctatgaggaggtagcatgcatgccaccattccagaggagaactctggttctgattgga
gcacagggagtgggccgccgcagtctgaaaaaccgtctgttggtgctgcatcctgaccgc
tatggaaccccagtaccattcacatctagaaggcctcgagaggatgaacacaatggtcag
acttaccagtttgtgccaaggatggacatggagatggacattaaattgggatgtttcttg
gagcacggcgagtatgatggcaacctgtatggcaccaagataagttctattcatgaggtg
gtgaacacaggacgcacctgcatcctggacatcaaccctcaggctctgaaggtgctgcga
acagcggagtttatgccctatgtagtgttcatagcggctcctgagttcgaaaccctgaaa
gctatgcacaaagctgtctgcgatgcaggattcacaaccaaacagctcacagtgtgtccc
gttagattgattgaagcaatcatgaacatcagagagctgtctatgggatcaaagcaaccc
attttgaagctgagaaaagaggaaacataa
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