Ictalurus punctatus (channel catfish): 108272382
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Entry
108272382 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108272382
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108272382
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108272382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
SWIM
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
ZZ
Motif
Other DBs
NCBI-GeneID:
108272382
NCBI-ProteinID:
XP_017336260
Ensembl:
ENSIPUG00000018064
UniProt:
A0A2D0S234
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Position
12:14382466..14387901
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AA seq
570 aa
AA seq
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MLRKRVWRKAANDAVSWHQDESLNTTIFILKEFGPTGFLLKEDREPKNYKVFLGDPHTCT
CGTFQKEKDLCKHICWVLMRKFRLPRDHEYCFQPGLVERQILEVLQRPYRTDISVPSAPA
QLCSSEEDDGTIRKKDIRDDDICPICQEELLRKRLPVAHCRFGCGNNIHISCMKVWADHQ
SRSKTDGMVKCPLCREDFCMLKMLLEQVKNAGQLCTSSERERLEKHLGIPCNNCRICPVV
GKCFKCSVCSYYHLCEDCFKRNCHPQHSFAVRMKRNQSWQVMMESKKSLTVNQETNTNSE
TAVMSDVVPEHVLRMFPVIQVHQRSRLLEHGVQCRLCLQSFHVGQQVKTLPCRHKFHSGC
IKTWLRQSICCPVDWHVIYNPLTWSGNDIKTTSTALPASSAQVNLTDQQNTELYVPGIGL
QRKEISDISKAASLAPVSLKSMVQNTQALCIDSKQFCESRSMQRCPSLEQAPVLASKKRM
HAKTSCPSLSLSPAVVRMELSRGTQRSLFVGFNKLDNKPQRKASSVHGQMRPVRLEGDGV
GVRTWSSSGDQSILDLQPTSIPISAKHERN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctccgaaaaagagtttggagaaaagcagcgaacgatgctgttagttggcatcaagat
gagtccctcaacaccaccattttcatcctgaaagaatttgggcctacagggttccttctc
aaagaagatagagaacccaaaaactacaaagtattcctgggtgatcctcacacgtgcact
tgtggaaccttccagaaagagaaggacctctgcaaacacatctgctgggttttgatgcgc
aaatttaggctaccaagagatcatgaatactgtttccagccaggtcttgtagagagacag
atcctggaggtgttacagcgtccgtacaggacagacatcagcgtcccatcagcccctgca
cagctttgctctagtgaggaagatgatggtacgatcaggaagaaagacattagggatgac
gatatctgtcccatctgtcaagaagaactgcttagaaaaagacttccagtggcgcattgc
aggtttggatgcggaaacaacattcatatctcctgcatgaaagtgtgggctgaccatcag
agcaggtccaagacagacggcatggtgaagtgtccactgtgccgggaggacttttgcatg
ttaaagatgctgctggaacaggtgaaaaatgctggtcagctgtgtacctcctcagagaga
gagcgtttggagaaacacctggggatcccatgcaacaactgcagaatctgtcctgttgtt
ggaaaatgttttaagtgcagtgtgtgcagttattaccacctgtgtgaggactgctttaag
agaaactgccatcctcaacacagctttgccgtgagaatgaaaagaaatcaatcatggcaa
gtaatgatggaaagcaagaaaagcttaactgtcaatcaagagacgaacactaacagtgaa
actgctgtaatgtcagatgtggttccagagcacgttttgaggatgttcccagtaatacaa
gttcaccaacgttcccgactactggaacatggagtacagtgtcgcctttgccttcagagc
ttccacgtgggccagcaggttaaaactctcccctgtcgacacaagtttcattctggctgt
atcaagacatggttacgacagtccatctgctgccctgtggactggcatgtcatctacaac
cctctcacatggagtggcaatgacattaagacaactagcacagcactccctgctagtagt
gcccaggtcaatcttactgatcagcagaacacagagttgtatgtacctggtattggcttg
cagaggaaagaaatatctgacatatctaaagcagcctcactggctcccgtttctctcaaa
tccatggtccagaacacccaggccctctgcatcgacagcaaacagttctgtgaatccaga
tccatgcagaggtgcccgtctttggaacaagctccagtcttggcctctaagaagagaatg
catgcaaagacatcctgtccgagcttgtccttgtctcctgcagttgtgaggatggaacta
tctaggggaacccaacggagcttgtttgtgggtttcaataagcttgacaacaaaccccaa
cgcaaggcaagctctgttcatgggcagatgagaccagtgaggttggagggtgatggtgtg
ggtgtacgaacatggtcgagcagcggagatcaaagcattcttgacttacagccaacaagt
atacctatcagtgctaaacatgaaaggaactaa
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