Ictalurus punctatus (channel catfish): 108272387
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Entry
108272387 CDS
T04658
Name
(RefSeq) neuronal pentraxin-1 isoform X1
KO
K25709
neuronal pentraxin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108272387
SSDB
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GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
CCDC170_1st
Laminin_G_2
SlyX
HEAT_ULK4
ODF2_C
DUF7989
DUF6674
RUNDC1
Motif
Other DBs
NCBI-GeneID:
108272387
NCBI-ProteinID:
XP_017336267
Ensembl:
ENSIPUG00000022123
UniProt:
A0A2D0S0K9
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All DBs
Position
12:complement(15723235..15731530)
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AA seq
427 aa
AA seq
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MERVSWTLLLLSSAVFLSGSAQEFGATQFVCTSVPKDADLCAATMQNSAPAEDLKSTVLQ
LRETVLQQKETIMSQKETIRELTGKLSRCEGAQEDGGTAQKAGGRRKESGKNTMGDVSRT
PGDTLAQLGLTLATLKQRLENLEQYSRTNGSVQANSLKDLLQNKIDDMEKQVLSRVNTLE
ESKAGASNDTEQRNRVESTLSTLHHRVTDLEKGPKGSRPMDKFQLTFPLRTNYMYAKVKR
SLPEMYAFTLCLWIKSNASPGVGTPFSYAVPGQSNELVLIEWGNNPMEILINDKVAKLPF
LINDGKWHHICITWTTRDGVWEAFQDGVLRGTGENLAPYHPIKPNGVLVLGQEQDTLGGG
FDATQAFVGELANFNVWDKKLSSSEIYNLATCSSRAQSGNVLSWSESNIDVFGGATKWTF
EPCRQLN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagtctcttggacacttttgctactttcctccgcggtgtttttgtccggatcc
gcgcaggagttcggcgccacacagttcgtgtgcacgtcggtgccgaaggacgcggacctg
tgcgcagccacgatgcagaacagcgcaccggcggaggacctgaagagcaccgtgctgcag
ctccgggagaccgtcctgcagcagaaggagaccatcatgagccagaaggagaccatccga
gagctgacgggaaagctgagccgctgcgagggcgcgcaggaggacggaggaacggcgcag
aaagccggcggacgcaggaaggagtcgggcaagaacaccatgggggacgtgtcccgaact
cccggggacacactggcgcagctcgggctcactttagctacgctcaaacagaggctggag
aacctggagcagtacagccggacgaacggctcggtgcaggccaacagcctgaaggattta
ctgcagaataaaatcgatgacatggagaagcaggttctgtctcgagtcaacacgctggag
gagagtaaagcaggagcgagtaacgacacggagcagcgcaaccgcgtggagtcaacactg
agcactctacaccaccgagtcactgacctggagaaaggacctaaaggcagcagacccatg
gataagttccagttgacgttcccattacgcaccaactacatgtacgctaaagtgaagcgc
agtctgccggagatgtacgctttcacgctgtgcctgtggatcaaatccaacgcctcgccc
ggagtgggaacgccgttctcctacgccgtgccaggacagtccaacgagctcgtgctcatc
gagtggggcaacaatcccatggaaatcctcatcaacgacaaggtcgcaaagctgcccttc
ctgataaacgacgggaaatggcatcacatctgcatcacgtggacaacacgtgacggtgtt
tgggaagcgtttcaggatggtgttctgcgtggaactggagagaacctggctccgtatcat
cccatcaaacccaacggagttctggtcttgggccaggaacaggacacgctgggtggcgga
tttgacgctacgcaagcgtttgtaggtgagctggcgaatttcaacgtgtgggacaagaag
ctgtcgtctagcgagatctacaacctggcaacctgcagcagcagagcacaatccggcaac
gttctgtcctggtcggagtctaacatcgacgtgttcggcggcgccaccaagtggactttt
gagccgtgccgtcagctcaactga
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