Ictalurus punctatus (channel catfish): 108272391
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Entry
108272391 CDS
T04658
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108272391 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108272391 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108272391 (chrna1)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108272391 (chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
ChrB_C
Claudin_2
Motif
Other DBs
NCBI-GeneID:
108272391
NCBI-ProteinID:
XP_017336272
Ensembl:
ENSIPUG00000019058
UniProt:
A0A2D0S0L4
LinkDB
All DBs
Position
12:complement(13924013..13934815)
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AA seq
462 aa
AA seq
DB search
MNHARVSLLPGILLLLVGLGSGPGQCSYDETRLIKNLFKGYNKVVRPVNHFNDAVVVTVG
LQLIQLISVDEVNQIVTSNVRVKQQWKDVNLKWNPDDYGGIKKIRIPSTDIWKPDLVLYN
NADGDFAIVHQTKVLLEHTGLITWNPPAIFKSYCEIVVVYFPFDLQNCSMKLGIWTYDGN
LVVINPDSDRPDLSNFMESGEWVMKDYGSWKHWVYYACCPNTPYLDITYHFLMLRLPLYF
IVNVIIPCMLFSFLAGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLI
GKYMLFTMILVIASIIITIIVINTHHRSPSTHTMSPWVRKIFIDTIPHFMFFSSMKRPSE
ERKDRRPFPADFDISDISGKPVPSSVTFQSPIIKHPEVQSAIDGVKYIAETMRGDEESNN
AAEEWKFVAMVLDHILLCVFMAVCIIGTVGVFAGRLIELNML
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgcacgagtgtctctgcttcctgggattcttcttcttctagtcggtctaggt
tcaggtccaggtcagtgctcttatgatgagacgagactgataaagaatctgtttaaaggc
tataacaaggtggtccggcctgtgaaccatttcaacgacgccgtggtcgtgactgtcggg
ctgcagctcatccagctcatcagtgtggatgaagttaatcagatcgtcaccagtaacgtg
cgtgtcaagcagcaatggaaggatgtgaacctgaagtggaacccagacgactacggagga
atcaagaagattcgaattccctccactgacatctggaaaccagatttagtgctttataac
aatgctgatggagacttcgccattgtgcaccagacaaaggtcttgctggaacacaccggg
ttgatcacgtggaatcctccagccatctttaagagctactgtgagattgtggtcgtttac
ttcccttttgatctgcagaactgcagcatgaagctcggcatatggacctacgatggaaac
ctggttgtcatcaacccggacagcgaccgtccagacctcagtaacttcatggagagcggt
gagtgggtgatgaaggactacgggagctggaaacactgggtgtattatgcatgttgccca
aacacaccgtatctggacatcacctatcacttcctgatgctgagactgccgctgtacttc
atcgtgaacgtcattatcccctgcatgctcttctccttcctcgccggcctcgtcttctac
ctgcccactgactccggtgagaagatgaccctcagtatctccgtcctgctgtctctcact
gtgttcctcctggtgatcgtcgagctgatcccgtccacctccagtgccgtcccgctcatc
ggcaaatacatgctcttcaccatgatcctcgtcatcgcctccatcatcatcaccatcatt
gtcatcaacacgcaccaccgctctcccagcacacataccatgtctccctgggtccgcaag
atcttcatcgataccattccgcacttcatgttcttctcctccatgaagcggccgtctgag
gagcggaaagacagacgcccttttcctgccgactttgacatctcggacatttctgggaaa
cctgtgccctcttccgtcacgttccagtcacccatcatcaaacacccggaggtgcagagc
gccattgatggtgtcaaatacatcgctgaaaccatgagaggtgacgaagagtccaacaac
gctgctgaggagtggaagttcgtggcaatggtgctggatcacatcttgctctgcgtgttc
atggccgtgtgtatcattggcacggtgggagtcttcgccggacgcctcatagagctcaac
atgctgtaa
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