Ictalurus punctatus (channel catfish): 108272392
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Entry
108272392 CDS
T04658
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108272392 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108272392 (grin2da)
04082 Neuroactive ligand signaling
108272392 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108272392 (grin2da)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108272392 (grin2da)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
108272392
NCBI-ProteinID:
XP_017336274
UniProt:
A0A2D0S0K0
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Position
12:complement(19436128..19559129)
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AA seq
1901 aa
AA seq
DB search
MVVQPAISLLLAVLACSGPAWSSPPLLLRPRERERDSGGASGGVNIAVVHSGSSHLPETS
VGVGGTLAAGAGSAAGTGVGTGWSGQVGESVMTPWGPANVIWLAVNESSPGSLLLQLCEL
LASTPLQGLVFEQEKPPPPERAPLAPVLEFVSAQTGVPIMAVGGGAGLGREPQESGSVYL
QFSCSTALQLEVIFEVLEEFDWTAFSVVTTRHHGYEDFLDMVEGITDGSFIGWERKSMVM
LNLTDDPGGARTRRLLKENEAQVRLLYCSHEEAEQIFRAAWLSGQATPSHMWFAVGPALS
GLGVEGLPKAFFTVRPQGWRDEPRRRIAKGVSILTHGAMALRRDYGGARGTGFAGNCMTD
GNQTQRVPDRIRYFSNITLSGRDYSFNVDGYLANPLVDVISYTAGRGWEEVGWWENGVLR
LRYPPWSRYGPFLKPLDDSQHLRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLPLNTSV
VLEGIHSMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGEWNGMVGEVVSQR
ADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVM
CLSVVAVTVFIFEFFSPVGYNRSLQSGKRAGGSKFTIGKSVWLLWALVFNNSVPVENPRG
TTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQPTEQYPPLRFGT
VPNGSTEENIRSNYPNMHQFMVRNNQRGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEG
CKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDK
IEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCLGRSKGLDFLLAFSRG
MYSCCNFEDETTPVGNQMTLPQYHPISTMPPPAPPHMVTTNVANSSITTAQQQQQQKLHQ
QLQQPVYNALLPGSLPTAGHSGMALGPSNSPILGAPMPCSTFLPRHDRRLAVVDRWTRPK
TGPDKTSAISSGITDVAQFPQAMPPQWAAVGGGEGGLDEYKRYYGPIDPEGLGVTGDPQS
VVSQTPKTAHQTKSMGNSRLPQKKQPSGHLPINPALHHSSSPQQSFWRRSSLSKRKGSGG
PLYENILPLGRRGGGRYGGRDGAGRRGRRPPPLPLPIPLPFSSPKQIPLSPSPSVHYIST
SSSTSSSSSTSSSVSVSRSNSPSYSTSSYSSSQSFKYRAGERDAYDEFDTDELTEESSLL
LGRRKSRSHMSSRSLPCSPPPPIPPRKPCLQKAQMRDSTTSQLAQLQEWWASWGEKERAR
RAGGGRGKGKEEKRYYKERERERRRRKKGRKKKKRGEHKREREHKRHKVKKKKKKDGKSR
KREKEKRSGQEEGEIDGKEIFEKGIEQNLPSYPELRRSSFQKKSESSMRSYDWDIKREGG
RRESDNQEGGDEEGARRREKHHRNPQSYHHSRPKSNSKRYPTSSKCSTSVKFWGSGNAHS
ESPSSFLPLFPLNYKRTQSFGSEREEHGKGGEIRPLLGKNGKGKTCSREGLAYHEWDSEE
EEGEESDERDRTEERRRRRRRRESRVIESESERERDKTVEIYTDDEGSSGEFGKFERYWE
GHEGRAVGGIGGGGWFFGTYPARERGGSINSRDDLFLGLGGRESSCGFGGGSRWGSGGLE
SNQWLQSPLTPPPPRRYWSVDKLPVKTEKKSKRRSQEKSECHTACSCQSPHHYKWNRVTS
RSQEDLLPHCQSFSNINRPKRQSSKPDQAQGQVKSGSQSNLSVHRSQRSERSRELSSPQT
LPPSLPAPMVPALPAPPSSSHPIHVPLPTSSSSVSSPSAISSTTGAMQPSSISSSSAKLQ
YQRLCSVPQPQRYQSPHLPFKTKSLCSRRDSAHFSSVESEV
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgcagcctgctatctcactcctattggccgtgctggcgtgcagcgggccggcc
tggtcgtcccctccgctactgctccgcccccgggagcgagagagggactcgggcggggct
tcgggaggagtcaacattgccgtggtccactcgggctcctcccacctcccggagacgagt
gtaggggtagggggcaccttggcggctggtgcaggcagtgcagcaggaacaggagtgggc
acaggctggtcggggcaggtgggtgagagtgtgatgacaccatggggtccagccaatgtg
atctggctggcagtaaatgagagcagccctgggagcctgctgctgcagctgtgtgagctg
ctggccagcacaccactgcaaggccttgtgttcgagcaggagaagccgccaccgcctgag
cgtgccccactggcacctgttcttgagtttgtctcagcacaaactggtgtgcccatcatg
gctgtgggaggtggagctgggctgggcagagagccacaggaaagtggctcagtctacctt
cagttctcatgttccacggcactacagctggaggtcatctttgaagtactggaggagttc
gactggacagctttctcagtggtcaccactcgccaccatgggtatgaggacttcctggac
atggtggagggtatcacagatggctcatttattggctgggagagaaagagcatggtgatg
ctcaaccttactgatgatccgggaggagcaagaacccgcaggctgctgaaagagaatgag
gcacaggtgcggctcctgtactgctcacatgaagaggcagagcagatttttagggcagca
tggctctcaggccaggctactccttcacacatgtggtttgctgtgggcccagccctttct
ggacttggagtggaaggtctgcctaaggctttctttactgtgcggcctcaaggatggcga
gacgagccacgtcgtcgcattgctaaaggtgtgtctattctgacgcatggagccatggca
ctaagaagagattatggtggagcaagagggacaggctttgccgggaactgcatgactgat
ggcaaccagacacagagggtgcctgacagaatcaggtacttcagtaacatcactctgtcg
ggacgagactactcctttaatgttgatggctatttagccaatccactagtggatgttatc
tcctacactgcaggtcgggggtgggaggaggtgggctggtgggagaatggcgtgctgcgt
ctgcgttacccaccctggtcgcgttatggtccattcctcaaaccactcgatgacagtcaa
cacctgcgtgtggtcactctggaggagaggccctttgtcatcgtcgagccagccgaccct
ggaactggctcatgtattcgtgactctgtgccgtgccgtctacccctcaacaccagtgtg
gtgttggaaggcatacactcaatgaagcattgctgcaaaggtttctgcattgatgtcctc
aagcgactggccaaaattgtaggtttcacctatgacctctacctggtgacaaatggcagg
catgggaagaacatagacggagagtggaatgggatggttggggaggtggtgtcccaacga
gcagacatggccattggctcactaactatcaatgaagagaggtcagaagttgttgaattc
tcagttccctttgtggagactggcatcagcgttatggtttctcggagcaatggcaccgtc
tctccatctgctttcctggagccttacagtcctgcagtatgggtgatgatgttcgtcatg
tgcctgtctgtggtggctgtaaccgtttttatctttgagtttttcagccctgttggatac
aaccgaagtctacaaagtggaaagagggcaggcggatctaagttcacaattggaaaatct
gtgtggctgctgtgggctctggtctttaataactcagttcctgtagaaaaccctagagga
accacaagtaagatcatggtactggtttgggctttcttcgctgttatctttttggcaagc
tacactgctaacctggctgccttcatgatccaagaggagtacatagacacagtgtctggc
ctcagtgacaagaagttccagcagcccacagagcagtaccctccacttcgctttggtact
gtcccaaatggcagcacagaagagaatattcgcagcaactaccctaacatgcatcaattt
atggtgcgcaacaatcagagaggagtcgaggaggccattgacaaccttaagactggcaaa
ctggatgcctttatctacgatgcagctgtgttaaactacatggcacggaaagatgagggc
tgtaaagtgatgaccattggttcagggaaggtgtttgccactacaggatatggcattgct
ctgcacaaaaactcacgctggaagcgacctctagaccttgctttgctgcaactggtggga
gatgatgaaattgacatgcttgaacgcctctggctttctggcatttgtcataatgataag
attgaagtgatgagttccaagctggacatagataacatggcaggtgtcttctacatgcta
ctggtggcaatgggtctcagccttttggtctttgcctgggagcacctagtttactggaag
ctgcgccattgcttgggtcgttcaaagggattggactttctgctggcttttagtcgggga
atgtacagctgctgcaattttgaagatgaaacaacccctgtaggtaaccaaatgacactt
ccacagtaccatcccatctccactatgccccctcctgctccgcctcacatggtgactaca
aatgtagccaactcttccatcacaacggcacaacagcaacagcagcaaaaacttcaccag
caactgcaacagccagtgtacaatgcccttcttcctggatctctgccaacagctgggcat
tcaggcatggcacttggaccttcaaacagcccaattcttggagcacccatgccatgctct
acatttttacctcgtcatgatcgacgactggctgtagtggatcggtggacacgtccaaaa
actggccctgacaagacaagtgccatcagcagtgggatcacagacgttgcacaattccca
caggccatgcctccacagtgggctgcagtaggtgggggagaaggaggtctggatgaatat
aaaagatactatggcccaattgatccagagggattaggagtcactggagacccacaaagt
gtagtttcccaaactccaaaaactgcacatcaaacaaagtccatgggaaactcgaggttg
ccacagaaaaaacaaccgtctgggcatttacccataaacccagctttgcatcattcttct
tcaccacagcagtctttctggaggagaagcagtctttcaaaaagaaaaggctctggggga
cccttatatgaaaatatccttcctttgggacggagaggtgggggcaggtatggaggaagg
gatggagcagggaggagaggtcgtcgtcctcctcctttgcctcttcctattcctcttccc
ttctcctcccctaaacaaattcctctttcaccctcaccttctgtgcactacatttccact
tcctctagcacatccagctcctcttccacctcctcctctgtatcagtctcgcgatctaat
tctccttcctactctacttcttcttactcatcatcacagagtttcaaatacagggcgggt
gaaagagatgcatatgatgagtttgacacagatgaacttacagaggagtccagccttctt
ttgggtaggagaaaaagtcgttcacacatgtcatctcggtccctgccatgcagtccacct
ccccccataccaccacgcaaaccttgcctacaaaaggcacagatgagagacagcaccact
agccagctggcacaactccaggagtggtgggcttcatggggggaaaaagagagagctaga
agagcaggtggagggagaggtaagggcaaagaagagaaacgatattataaagagagagaa
agagagagaaggaggaggaagaagggtcgaaagaaaaagaagagaggagaacataagaga
gagagagagcacaaaagacataaagtaaagaagaaaaagaaaaaagatgggaaatccagg
aaaagggagaaggaaaagcgatctggtcaagaagaaggtgaaattgatggtaaagagata
tttgaaaaagggatagaacagaatctgccttcctaccctgaacttaggcgtagctctttc
caaaagaagagtgaaagctctatgcggagttatgactgggatataaaaagagagggagga
aggagagagagtgataatcaagagggtggtgatgaagaaggagctaggagaagagaaaag
caccacaggaaccctcagtcctatcaccattccaggccaaagtctaacagtaagcgctat
cccacttcaagtaaatgctcgacatcagttaaattttggggtagtgggaatgcacattct
gaatctccatcttcttttcttcctctttttcctcttaactataaaagaacacagtctttt
gggtctgaaagagaggaacatgggaaaggaggtgagattcgcccccttttaggaaagaat
ggaaaaggtaagacctgctcaagagaaggcctggcatatcatgaatgggattcagaagaa
gaggaaggggaagaatcagatgagagagatagaactgaagaacgaagaagaagaagaaga
agaagagagagcagagtaatagaatcagaatctgaaagggagagagacaaaactgttgag
atctatacggatgatgaaggttcttcaggtgaatttggcaagtttgagagatactgggaa
gggcatgaaggaagggctgttggaggcattgggggtggaggctggttttttggcacttat
cctgctagggagagagggggcagtataaacagtagagatgacctttttttggggttagga
ggtagggaaagcagctgtggttttggaggaggctccagatgggggtctggaggtttagaa
tcaaatcagtggctgcaatcacctttgactcccccacccccacgaagatactggtctgta
gacaaattacctgtgaagactgaaaagaagtctaaaaggagatcacaggagaaaagtgaa
tgccatactgcctgttcttgtcagtcgccccaccactataagtggaaccgagtgacctct
cgtagtcaagaggacctgctgcctcactgccaaagtttcagcaacattaaccggcccaaa
cggcagtcctccaaaccggaccaagctcaaggccaagtaaaatctggaagtcaatcaaac
ctcagtgttcatagatcacagcgttctgagaggtccagagagttatcatctcctcagact
ctaccaccatctctgccagccccaatggtcccagctctccctgcacctccatcatcttcc
cacccaattcatgttcctctacctacctcctcctcctctgtttcatcgccttcagccatt
tcctcaacaactggtgccatgcagccctcctctatatcctcctccagtgccaagctccag
taccagagactgtgttcagtgccccagccacaaaggtaccaatcaccacatcttccattc
aaaaccaagagtttgtgctcacgtcgagactctgcccacttttccagtgtggagagtgag
gtctga
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