Ictalurus punctatus (channel catfish): 108272400
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Entry
108272400 CDS
T04658
Name
(RefSeq) GATA-type zinc finger protein 1 isoform X1
KO
K21630
GATA-type zinc finger protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272400
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108272400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA
Motif
Other DBs
NCBI-GeneID:
108272400
NCBI-ProteinID:
XP_017336283
Ensembl:
ENSIPUG00000016640
UniProt:
A0A2D0S0K3
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Position
12:10811796..10819291
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AA seq
537 aa
AA seq
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MSSEVNPPADLRNCPMTSESTRDDMDHEDTCMTQSSLLYLLHEATKLVTPPEQHSLDADK
LHDGSKETIVSHNLTSLKQKGQEVRTVKTQPSFTAGLSVLSSSPWEVMSLINLQCERLLH
SGGTEEEDSKTHTTKINTKSKDRDVAQEWSSFPSAGFTSCTMSSRADAMELAMESDVCCS
VPHIDPTDHLSIRRTGENRESATIRDVEDLAELISETTEDSLLSSRVMSEERADPCFLGE
TSELPLDLTKQVEICEHTVENGEGVNEMASISSISKSPHSREISSVDFTSSLVAEKYEDS
CFSFNEGENPECESALLSETPPSRTDLNNNLEDEKVREAEKILTAISAQSSWGNRRRTPR
KQAHPARSADLQDPGLQGVMFSMHPELDHSTDQCRLLITSNYSKLCRRGRRSRSYSSTSL
QNSQRTSSSEEESDSASLYKKICASCCTKKTPLWRDAEDGTPLCNACGIRLMKKNENNPH
FCCSDWKSWFEHDRYKKYRVRCMQCWNIPRKEASSNSKCLKCGDLLQLSSQSKRAGW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgaagttaaccctccagctgatctcaggaactgccccatgacctcagaaagt
accagagatgacatggatcatgaagacacttgcatgactcagtcttctctcttgtacctt
cttcatgaagccactaagcttgttacaccaccagaacagcacagtctggatgcagacaaa
ctccatgatggctccaaagagacgattgtttcacacaacttgactagcttgaagcaaaaa
ggtcaggaagttagaactgtcaaaacacagcctagctttacagcaggcttgtctgtgttg
agcagtagtccatgggaggtgatgagtctcataaacctccagtgtgagaggctgctgcac
tctggtggaacagaggaagaagactccaaaacccacacgactaaaataaatactaaatct
aaagacagagatgttgcgcaagaatggtcctcgtttccttcagctggttttacttcttgt
accatgtcctcgagagctgatgcgatggaacttgcgatggagtctgatgtttgctgctct
gttccacatatcgatccaactgatcacctgtcaattcggcgcactggtgagaaccgtgaa
agtgcaacaatcagagatgtagaggatcttgcagagctaatttctgagaccacagaggac
agtttactttccagcagggtaatgagtgaagaaagggctgacccctgtttcctgggtgaa
acatcagagctaccacttgacttgacaaaacaagtggaaatttgtgaacacaccgtagag
aacggtgagggtgtgaatgaaatggcgagtatttcgtctatatccaagtctccacacagt
cgtgaaataagctctgttgactttacatcatcgttggttgctgaaaaatatgaagactct
tgcttttctttcaatgaaggtgaaaatccagagtgtgagagtgcattgttgtcagaaacc
ccaccatcaagaacagatttaaacaataacctggaggatgagaaggtccgggaggccgaa
aagattcttactgcgatctccgcacagtccagttggggtaaccgaaggaggacgcctagg
aagcaggctcaccctgcacgcagtgctgatctccaagacccagggcttcagggagtcatg
ttcagcatgcacccagagctggatcacagcacagatcagtgccgcctcctcatcacctcc
aactacagtaagctgtgcaggcgtggcaggaggagcagaagctatagttccacatcactg
cagaattcccagcgaaccagcagctcggaagaggagagtgactcggccagcctgtacaag
aagatatgtgcatcatgctgcacaaagaagactcctttatggcgagatgcggaagatggt
actccactctgcaatgcctgtgggatcagactaatgaagaaaaacgagaacaatccccac
ttctgttgttctgactggaaatcctggtttgagcatgacaggtataagaagtaccgcgtg
cgctgtatgcagtgttggaacattccccggaaggaggccagctccaactccaagtgtttg
aagtgtggagatctcctccaactctcctcgcaaagcaaacgggctggatggtag
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