Ictalurus punctatus (channel catfish): 108272401
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Entry
108272401 CDS
T04658
Symbol
lratd2a
Name
(RefSeq) protein LRATD2a
KO
K22810
protein FAM84B
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108272401 (lratd2a)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108272401 (lratd2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRAT
NLPC_P60
SH3_CYT4
Motif
Other DBs
NCBI-GeneID:
108272401
NCBI-ProteinID:
XP_017336292
Ensembl:
ENSIPUG00000012820
UniProt:
A0A2D0S0N5
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All DBs
Position
12:22681146..22682847
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AA seq
251 aa
AA seq
DB search
MGNHVDKLAHLSYAEVPTAEPSGTDAEDDGARIGVSYIFSTDNDDALTDDRTDERTPPPP
HELECAVYHTAACVYERRARDMRAQSAETLMSKCVPGDVLEFVAAGQSPHWAVYIGDFQV
VHLHRAEVKCGFVMDAGRGRRCRIVNQLYKYEPLSANAVVRNATEHVGMKERELSWRNSE
CFAAWCKFGRREFKMGGELRIGKQPYKLKLLLNGKQAHELEFQSLEDAIMERRRRDRLGK
PAVLHELEGQR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaccacgtcgataaactcgcgcacctgagttacgccgaagtgccgaccgcggag
ccgagcggcacggacgcggaggacgacggcgcgcgtatcggcgtgtcctacatcttctcc
acggacaacgacgacgcgttgacggacgacaggacggacgagaggacgccgcctccaccg
cacgagctcgagtgcgccgtctaccacacggccgcgtgcgtgtacgagaggcgcgcgcga
gacatgcgcgcgcagtccgcagaaaccctgatgagcaagtgcgtgcccggggacgtcctg
gagttcgtcgccgccggccaaagtccccactgggctgtgtacatcggcgactttcaggta
gtgcatctgcacagggcggaggtgaagtgcggcttcgtgatggacgcgggccgcggcaga
cgctgccggatcgtgaaccagctctacaagtacgagccgctgagcgccaacgccgtggtg
cgaaacgccaccgagcacgtgggcatgaaggagcgcgagctgagctggaggaactcggag
tgcttcgccgcctggtgcaagtttggcaggcgggagttcaaaatgggcggagagctgcgc
atcggaaagcagccgtacaagctgaagctgctgctgaacggcaaacaggcgcacgagctc
gagtttcagagtctggaggacgcgatcatggagaggagacgcagggacaggctgggcaaa
ccggccgtgctgcatgagctggagggacagaggtga
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integrated database retrieval system
