Ictalurus punctatus (channel catfish): 108272428
Help
Entry
108272428 CDS
T04658
Symbol
slc32a1
Name
(RefSeq) vesicular inhibitory amino acid transporter
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108272428 (slc32a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108272428 (slc32a1)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108272428 (slc32a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
108272428
NCBI-ProteinID:
XP_017336338
Ensembl:
ENSIPUG00000004778
UniProt:
A0A2D0S0Q5
LinkDB
All DBs
Position
12:5470366..5473954
Genome browser
AA seq
530 aa
AA seq
DB search
MATLIRSKISNKLSNAASTVTNKSQAKVSGLFARMGFQAATDEEGLGFAACDDLDYDHRQ
GLQMDILKNEEIGEEVGVDNVGDGNMEGDSHYQRDGTGPPPSVSKDGGICSEFGSTDKPK
ITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENE
DGQLVRVRDSYVDIANACCAPRFPAIGGHIVNVAQIIELVMTCILYVVVSGNLMYNSFPN
LPVSQRSWAIMATVALLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWD
KVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQKPSEFHCMMNWTHIAACILKGLFA
LVAYLTWADETKEVITDNLPSGIRAVVNIFLVSKALLSYPLPFFAAVEVLEKSFFQDGRR
AFFPDCYGGDGRLKSWGLTLRCGLVVFTMLMAIYVPHFALLMGLTGSLTGAGLCFLLPSL
FHLKLLWRKLLWHQVFFDVAIFVIGGICSISGFIHSMEGLIEAFKYNIHD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctacattaattcgaagcaagatttccaacaagctgtccaatgcagcttcgacggtt
actaataaatctcaggcgaaggtaagtggtctcttcgccagaatgggcttccaggctgcc
actgacgaagaaggactgggattcgcagcctgtgacgatctggactatgaccacaggcaa
ggactgcagatggacattctaaaaaatgaggaaataggggaagaagtcggcgtcgataac
gtgggagatggaaatatggaaggggacagtcactaccagagagatggcacaggtccccca
ccctctgtgtcaaaagatggcggtatctgcagcgaatttgggtctacagataagccgaaa
atcactgcttgggaggcaggatggaacgtcactaatgccattcagggaatgttcgtactt
gggttaccatacgccattctccacggcggatatctaggactttttcttatcattttcgcg
gccgttgtgtgctgttacacagggaaaatccttatcgcttgcctctatgaagaaaacgaa
gacggacaactcgtgagagtgagagactcgtatgttgacattgccaatgcttgctgcgcg
cccagatttccggcaataggaggtcacatcgtgaatgtagcccagataattgagctcgtc
atgacttgcattttatacgtcgtagtgagtggtaacctaatgtataacagctttccaaac
ctccccgtctcccaaaggtcatgggccatcatggccaccgtcgcgcttctgccttgcgcc
tttctcaaaaacttaaaagccgtctccaagttcagcctgctctgcacccttgctcacttc
gtgatcaacatacttgtgatagcctactgcctgtcgagagcacgagactgggcctgggat
aaggttaagttctacatcgacgtgaagaaattccctatatctattggtatcatcgtcttc
agctatacatcgcagattttcttgccatcgttggagggtaacatgcagaaacctagcgag
ttccactgcatgatgaactggactcacattgccgcatgcattctcaaaggcctgtttgct
ttagtggcgtatctgacgtgggcagacgaaaccaaagaagttatcacagacaacttgccg
tctggtattagggccgttgtcaacattttcctagtgtctaaggccctgttgtcatatccg
ctgccgttttttgctgctgttgaggtactggaaaagagtttttttcaggatggacggcgt
gcgtttttcccagattgctatggaggagacgggcgccttaaatcctggggtctaactttg
cgatgtggccttgtggtattcactatgttaatggccatatacgttccgcacttcgcatta
ctcatggggttaacgggcagcctgacgggcgcgggcttgtgttttctcctccctagtctc
tttcacctgaagctgctttggaggaagttgctttggcaccaagtcttttttgatgtcgct
atatttgttattggaggtatatgcagtatttctggcttcattcattcaatggaaggtctc
attgaagcgttcaagtacaacatacacgattag
DBGET
integrated database retrieval system
