Ictalurus punctatus (channel catfish): 108272455
Help
Entry
108272455 CDS
T04658
Name
(RefSeq) POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108272455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272455
03021 Transcription machinery [BR:
ipu03021
]
108272455
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108272455
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
108272455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108272455
NCBI-ProteinID:
XP_053540059
UniProt:
A0A9F7TK16
LinkDB
All DBs
Position
12:17183536..17230460
Genome browser
AA seq
733 aa
AA seq
DB search
MFVPLPVPLVLQRAAPDLWRLKAPLPLRSTHGVYPYVRDIGDIGDIGDIGDIEVYPYVRD
IDDIGVYPYVRDIGVYPYVWDKAPRQGVRDFTSSDFLSVFKVDIRMNKAVDDEKNEADFP
ADSTDSKKNSPKSNDQVKVGEVPELSSHAPPPPAQPPLPHTQLMLAGSQLAGLAALLPAQ
QQLLLQQAQAQLLAAAVQQTNAAHAAAAASQQQAQQQQANQALAQVQTQAKTEQSPVHAP
PPLALSQPIQLTAQDIQQLLQLQQLVLMPSHPLQSHAQFLLPQAQAQQSPQGLLSTQNLI
SLPQQSPGSLLTTPPRLSMQTQRHHDARPCLVQREKGRDSSITPSAAAPMTLAATVTSHG
EEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRFEALNLSFKNM
CKLKPLLEKWLSDAETMAIDSMLPSPGSLSSPMLGFEGLPGRRRKKRTSIETNVRVALER
NFITQNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPSSTTPPLPSQPPSATH
KPPCYSSHMMSSQGLVQATTSNLNVTAVSPTPSVACPPNPIGHASMSSAPPSVTSPTLST
ASPSPTGNSMMGVSTSMNQALISSHPLATMQALAVRGGQMPFSTLESSGQMFLGGATAPG
MGLCSSFFLNRPTLLPMATGTSTGLVSTAHACSPSSASRMSPDSCSASLCSSPASYCSFS
EASPPPLGGAMAE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttcctctgccggtgccgttagtgctgcagagagctgctcccgacctctggcgg
ctcaaagccccgctgcctctgcgctccacacacggtgtgtatccttatgtacgtgatata
ggtgatataggtgatataggtgatataggtgatatagaggtgtatccttatgtacgtgat
atagatgatataggtgtgtatccttatgtacgtgatataggtgtgtatccttatgtgtgg
gataaagcaccacgacaaggcgtcagagacttcacctcatcagattttctttctgtgttt
aaagtagatatcaggatgaataaagcagttgatgatgagaagaatgaagctgactttcct
gcagacagcacagattcgaagaagaacagtcccaagtctaatgatcaggttaaagtagga
gaagtccccgagctcagttcccatgctccacctcctccagctcagcctcctctaccacat
acgcagctcatgttggctggcagtcagctagcagggctggcggctctgctacctgcacag
cagcagttattgctccagcaggctcaagcacagctcctggccgcagcagtgcagcagacc
aatgcagctcatgcagctgctgcagccagtcagcaacaggctcagcagcaacaggccaat
caggctctagcacaagtccagacacaagccaaaacggagcagagtcctgttcatgctcca
ccaccacttgccctctcacagcccatccagctcactgcccaggacatccagcagctgttg
cagctgcagcagttggtgctgatgccaagtcaccctctgcagtctcatgcccagttcctc
ttgccacaggcacaagcccagcagagcccacagggtctgctttcaacacaaaatttgatt
tcactacctcagcaaagccctggatctctcctgaccactccacccagactgagcatgcaa
actcagcgccatcatgatgccaggccatgcttggtacaaagggagaagggaagggacagc
agcattacaccatcagcagctgcacccatgaccttggctgccacagtaacctcccacggt
gaggagccgagtgacctggaggagctggagcagtttgctcgcaccttcaaacaaaggagg
attaaacttggcttcacccagggtgatgtgggaatggccatggggaagctgtatggtaat
gacttcagtcagaccaccatctcacgctttgaggcgctcaacctcagcttcaagaatatg
tgcaagctcaaacccctgctggagaaatggctgagtgatgcagaaaccatggcaatagac
agcatgctgcccagtcccggctcgctgtcctctccgatgctaggctttgaggggttgcct
ggacgacgcaggaagaaacgcaccagcattgagacaaacgtccgcgttgctctggagcgt
aacttcatcacacaaaaccagaagcctacctcagaggagatccttctgatggccgagcag
ctcaacatggaaaaggaggtgatccgtgtctggttctgcaaccgccggcagaaagagaaa
cgcatcaacccctcaagcaccacccctcccctgcccagccagcccccctctgcaacacac
aaacccccttgctacagttcacacatgatgtccagtcagggactagttcaggcaaccacc
tcaaatctcaacgtgacagctgttagtcccaccccctctgtggcctgccctcctaaccct
attggccatgcatcaatgagctctgccccaccatcggtgacttcccctactctcagcaca
gctagccccagcccgactgggaactcaatgatgggtgtaagcacaagcatgaaccaggct
ctcatcagcagccatccactggcgacaatgcaagctctggcggtcaggggaggccagatg
cccttttcaaccctagagagcagcggtcaaatgttcctgggtggggccacagctccaggg
atgggactatgctcctccttctttcttaaccggcccacattgttgcccatggccacaggc
accagtacaggattggtcagcacagcacatgcatgttcaccctccagtgccagccgcatg
agcccagactcctgctctgcctctctatgctccagccctgcttcctactgctccttcagc
gaagcctctcccccacctctaggaggggcaatggctgagtga
DBGET
integrated database retrieval system
