Ictalurus punctatus (channel catfish): 108272489
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Entry
108272489 CDS
T04658
Name
(RefSeq) TRIO and F-actin-binding protein isoform X1
KO
K23751
TRIO and F-actin-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108272489
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108272489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
Filament
Motif
Other DBs
NCBI-GeneID:
108272489
NCBI-ProteinID:
XP_017336411
UniProt:
A0A2D0S0Y7
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Position
12:complement(33077982..33107633)
Genome browser
AA seq
1279 aa
AA seq
DB search
MTRLDPPSHRNKSRMWMEEARNRDSFSRRSSVPHVSSKVDRDRESGYFSLGRVTGARTLS
DKSPSPHRHAERGHPLPSNRTPEPKAVIPFRNPDLGVPSQRRTSEIQNPDLAPVPLNSSP
EPVDLSIEVEAQAGPRSLSPTPFKQAESLAATQKRGFRAPNSSSGQFGNFFSSKQDSGFS
RSSSPSRNSSTFKRAESVSSLSSRGYGMDGVSERRDQQSKNPNQNSFGRPSESENIRKNF
RALASTVGAVSNLIKSQPSPYADLRAGLRKTEPSERGTKTRSPSPARRSHDTAGQPLLRK
TETKNFSSSQKKCESRNSSPTRSSSQSILHKVVEGWRSASPVRKGYGTSSQLEKSLVSNG
HSHKSTSSSPSRRSFEASSLPLHKSETKRHSPPLRRSYDAPTKQSSLHKSGSDRSSYSQS
PSPSKRVYDSPGQSHFHKLESSNYSATNRSSCNRSPSPSKRDYDPPGQSRFHKSESSNYS
GPNRTSDNRSLSPSKRGYDPPDQSRFHKSESGNYSGTTRTSDNHSSSPSRRGYDPPGQSL
FRSGHSNCSKSGRGQNILHKTVSETRIESASYMGKSTNSSTAGSWRGSTHSLESPPISRN
SSPSRKYSESKLVGVRKSAHVSWSTGDRRQGQDNHRPSCRNRSPSPLMRTHTSSQSSIDS
LMSSGSSGLNREEYAIMADLPKVKRVLQRARPKQMEGMERGNRDETSLYKPASHSHAKPA
HITWDDLMDQRGNPSPTHTSSHTQGNKMEQEKNERLQQPDLLNFKKGWMSKLDGSGEWKK
HWFVLTDAGLKYYRDSGAEEKDELDGEIDLCSCLKVSEFDVEKNYGFQIQTASGVFTLSA
MTAGIRRNWIEILRKNIRPSSTPDLTQLPDSTSNREESRHHSSRRQSDSSSTPAPTQRKF
DYVELSPVATPTLSAPANQREAGEGQVREHGQGQEDKSRNTQRETVTSRKWPGRTPEQKR
LEEEIERKWEEFERLPLKPTVSLSALGSLQREQVASLTQLTECVRGEGCVCACEGGVCVC
QSCSVSLEQMERAHRHALEELQRKHQRQTAEIEREKERLLNEETQATARAMEALRKAHKE
ELEREVQKAKHLTTQTEGTHTVPDQQQQELMSLRRELDGLSDRYSQKCLELNREQQNNGE
KERQISMKEREMEQLRRQNQDLQSRLTEEFRRMRSFVTGQRSEEGIVDGNKGRSVCELEV
LLRVKHNELEYLHKEIMCLRNEVQFLTTEKQSVCVQYQNVCEELKVLKERSEGEVQTLQE
HLRLTIAALQEERGLHNSI
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtttggatcccccatcacaccggaacaagtcacgcatgtggatggaggaagca
cgtaatcgagacagcttctctcgccgctcctctgtcccacatgtgagttcgaaggttgac
cgagatcgagaaagtggatatttctctctgggtcgtgtgactggtgctcggacattaagc
gataaaagtccttctccacatcggcatgctgaacgtggacatcctttaccaagcaaccga
acacctgagcccaaagctgtcattccattccgaaatccagaccttggtgttccttcacag
agaagaacctctgagatccagaatccagatttggctccagtgccattgaactcctctcca
gaacctgtggacctcagcatcgaagtcgaggctcaggcaggtccgagatctttaagtccc
acaccgttcaagcaggccgaatcattggctgcaacccaaaaaagagggttccgagcaccg
aattcatcttctggtcagtttggaaatttcttttcctccaaacaagattctggcttttcc
cgctcgtcatcaccgtcccgaaactcctctactttcaaacgggctgagtctgtctcctcg
ctatcgtcccgtgggtatgggatggacggcgtttctgagaggcgagaccaacaatccaaa
aacccaaatcagaattcctttggccgtccatctgagtctgaaaacattcggaaaaacttc
agagcccttgctagcactgtcggtgctgtcagtaatctcattaagtcccagccaagccca
tatgctgacctgagagccggtttacggaagacagagcccagtgagcggggcactaaaacc
cgaagtccctcccctgcaaggcggagccatgatacagctggccagccacttctccggaaa
acagaaacaaaaaacttttcaagtagtcagaagaaatgtgaaagccggaactcttcacca
accaggagtagcagccagtcaattctgcataaagtggttgaaggttggcgtagtgcttca
cctgtaagaaagggctatgggacatccagtcaactagaaaagagtcttgtttcaaatggg
catagtcataaaagcactagctcctctccttcaagaagaagctttgaggccagcagctta
ccattgcataaatccgagactaaaagacactcccccccattaaggcggagctatgatgca
cctactaaacaatcatcattgcacaaatctggatcagaccgatcttcctacagccaaagt
ccctccccttcaaagcgggtttatgactctcctggccaatcacattttcacaaattagag
agcagcaattactctgcaacaaaccgatcttcctgtaaccgaagtccctccccttcaaag
cgggattatgaccctcctggccaatcacgttttcacaaatcagagagcagcaattactct
ggaccaaaccgaacttctgataaccgaagtctctccccttcaaagcggggttacgaccct
cctgaccaatcacgttttcacaaatcagagagtggcaattactctggaacaacccgaact
tctgataaccatagttcttccccttcaagacggggttatgaccctcctggtcaatcactt
ttcagatcagggcacagcaattgttctaaaagtgggcggggccagaatatattacacaaa
actgtcagtgaaaccaggattgagtctgcatcctacatggggaaatcaactaatagcagc
acagcaggatcatggcgaggctccacccactctctcgagagcccaccaatatcccgtaac
tcctctccttctaggaagtacagtgaaagcaagctggttggtgtccggaaatctgcccat
gtttcctggagtactggtgacaggaggcagggtcaggataatcataggccctcctgccgg
aacagaagcccctcccccttaatgagaacccacacttcttctcagagctcaatagattca
cttatgtcaagcggctcatctggtctgaacagagaagaatatgccattatggccgacctt
ccgaaggtcaagagggtcctccagagggcaaggccaaaacagatggagggaatggagaga
ggaaacagagacgaaacatcattatacaaacctgccagccactcccacgctaaacccgcc
catatcacctgggacgacttgatggatcagcgaggaaatccctcccctacacacacatct
tcacacacacagggaaataagatggagcaggagaagaatgagagacttcaacagcctgat
ctgttgaactttaagaagggatggatgtccaaactggatggaagtggagagtggaaaaag
cactggttcgtgctgacagatgctggactgaaatactacagagactctggagccgaggag
aaagatgagttggatggagagattgatctctgttcgtgtttgaaagtctctgagtttgat
gtggagaaaaactatggctttcagatacagacggcaagtggagtgttcacactctcagct
atgactgcgggaatcaggaggaactggattgagattttgaggaaaaacatccggccgagc
agtacaccggaccttacacaacttccagacagcactagtaatagagaggaatctcgacac
cactcgtctcgccgccagtcagactcctcctccactcctgcccccacccagcgcaaattt
gattacgtcgagctctctcctgtagccacgcccactctttctgccccagccaatcagaga
gaggcaggggaagggcaggtgcgtgagcacggtcagggccaggaggacaagagccgaaac
acgcagcgggagacggtgacatcacgcaagtggccggggagaactccagaacagaaacgt
ctggaggaggagatcgagaggaagtgggaggagtttgagcgtctgcctctcaaacccacg
gtgtctctgtctgcgttgggatcgctgcagagggagcaggtggcatctctgacgcagctg
acggagtgtgtgcggggtgaagggtgtgtgtgtgcgtgtgagggtggggtgtgtgtgtgt
cagagttgcagtgtgagtttggagcagatggagcgtgcacacagacacgcgctggaggaa
ctgcagaggaaacaccaacgtcagaccgcagaaatagagagagagaaagagagactgctg
aacgaggagactcaagccacggctcgtgcgatggaggctctgagaaaagctcataaagaa
gaactggagagagaagtgcagaaagcaaaacaccttacaacacaaacagaaggcacacac
actgtcccagaccagcagcagcaggagctcatgtctctgaggagggagctggatggttta
tcagatcgttactctcagaaatgcctggaactgaacagagaacaacagaacaatggagag
aaagaacggcagatcagcatgaaggagagagagatggagcaactgcgcagacaaaaccag
gatcttcagtctcgtttaacagaggagttccggcgtatgcgctcatttgtcacaggtcag
aggtcagaggagggcatcgtcgacggcaacaaggggagatcagtgtgtgaactggaggtg
ctgctgagagtgaagcacaatgagctggagtacttgcacaaagagatcatgtgcttaagg
aacgaagtgcagtttctcaccacggagaagcagagtgtgtgtgtgcagtatcagaatgtg
tgtgaggagctgaaggtgttgaaggagagaagtgaaggagaggttcagacacttcaagaa
catctgagactcaccatcgccgccctgcaggaggagcggggactgcacaacagcatctaa
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integrated database retrieval system
