Ictalurus punctatus (channel catfish): 108272578
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Entry
108272578 CDS
T04658
Symbol
bloc1s4
Name
(RefSeq) biogenesis of lysosome-related organelles complex 1 subunit 4
KO
K08366
biogenesis of lysosome-related organelles complex 1 subunit 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108272578 (bloc1s4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108272578 (bloc1s4)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
BLOC-1 complex
108272578 (bloc1s4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLOC1S4
Spc29
TP_0813_N
AIP3
BLOC1_2
LRP1-like_beta_prop
HipN
Motif
Other DBs
NCBI-GeneID:
108272578
NCBI-ProteinID:
XP_017336550
Ensembl:
ENSIPUG00000017477
UniProt:
A0A2D0S2X5
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All DBs
Position
12:complement(27483215..27489198)
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AA seq
249 aa
AA seq
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MEHRLGRVPVLSPLEESSEEVSRDSGIVSQSTSTVSMLSEGLSNGNVSQSPSFGLNVSQS
PSFAGNVSESPSFGDNVPRSPSLDGAAAQSPVHEQEDEILRQTALSYSAYIRADAGEEIL
CLEKSLEEMLTRVDEFVGMLDMIRNDTSQIVNVSLPQIYRKAEDMRQIYRKIDKLEAFVK
MVAANVSVMEEQVIEAEGEARTLPGAFKKIFRTMNVSGFLNKPSSPKRAAQEIPSVFRTD
DFFPTQPEP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcggttaggacgggtaccggtgttgtctccgctggaggagtcgagtgaggag
gtgagccgagacagcgggatcgtgtcccaaagcaccagcacagtgtccatgctgagcgag
ggcctgagcaacggaaacgtctcccagagccccagcttcggacttaacgtctcccagagc
cccagtttcgccggtaacgtatctgaaagtccgagtttcggcgataacgtgcctcggagt
cccagtctagacggtgctgctgcccagagtcccgtccatgagcaggaggatgagatcctg
agacagactgcgctcagttactccgcttatatccgagcagacgcaggggaggagatctta
tgtctggagaaaagtctggaagaaatgctcactcgagtggacgagtttgtggggatgctg
gacatgattcgcaatgacacctctcagatcgtgaacgtcagcctgcctcagatttacaga
aaagcggaggacatgagacagatttacaggaagatcgataagctggaggcttttgtgaag
atggtcgcagccaacgtgagtgtcatggaggagcaagtaatcgaggccgaaggtgaagcc
cggactctacctggtgctttcaaaaagattttccgaacaatgaacgtctctggattttta
aataaaccatccagccccaaaagagcagcgcaggagattccctccgtgttcaggaccgac
gacttcttccccactcagccagaaccatga
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