Ictalurus punctatus (channel catfish): 108272587
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Entry
108272587 CDS
T04658
Name
(RefSeq) homeobox protein GBX-2
KO
K09321
homeobox protein GBX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272587
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108272587
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
CEP170_C
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
108272587
NCBI-ProteinID:
XP_017336563
UniProt:
A0A2D0S1C9
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All DBs
Position
12:complement(7446547..7450314)
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AA seq
330 aa
AA seq
DB search
MSAAFGSSFAMMQRPVGNTTAFSIDSLIGGSQQPSPGHFVYTGYPMFMPYRSVVLPPPPP
PPPPPGLNQAPPHHQLAALPAAIPGAFCSSLAQGMALTSTLMASLPQHPEAARKFGTQAL
HAAFDKSHEIRLDAEDGKSFLTKDAAALLPFHDEPLQSATVRSHGKDDPKEDECTRKDES
FSMDSDLDYSSDDNMPSASNPLCAKEDGEVSAGLEESARSGSGASGGKNRRRRTAFTSEQ
LLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNVNTKAGEPS
RNPKIVVPIPVHVSRFAIRSQHQQLEQARP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggcattcgggtcgtccttcgcgatgatgcagcgtccggtgggaaacaccact
gccttcagcatcgactcgctcatcggcggctcccagcagcccagtccgggacacttcgtg
tacactggctaccccatgttcatgccctaccgctctgtggtgcttcctcctcctcctcct
cctccacctcctcctggtctgaatcaggcgcctcctcatcatcagctcgccgctttaccg
gccgcaataccgggcgctttctgctccagtttggcgcagggcatggcgctcacctccacg
ctcatggccagccttccccagcacccggaagcggcccggaagttcggcacgcaggcgctg
cacgcggcctttgacaaatcccatgagatccgactggacgcagaagacggcaaaagtttc
ctgaccaaagacgccgctgcgcttctgcccttccacgatgagcctctgcagtccgctaca
gtacgaagtcacggcaaagacgatcccaaggaagacgagtgcacgaggaaggacgagagc
ttctccatggacagcgacctcgactacagctcggatgacaacatgccctctgcgtccaac
ccgctgtgtgccaaagaggacggcgaggtgagtgcaggcctggaggagagcgcgcgctcc
gggagcggcgcctcgggggggaaaaaccggaggcggcggacggcgttcaccagcgagcag
ctgctggagctggagaaagagttccactgcaagaagtacctgtctctgacagagcgctcg
cagatcgcgcacgccttgaaactcagcgaggtgcaggtgaaaatctggtttcagaaccgc
agagcgaagtggaagcgcgtcaaggcggggaacgtgaacacgaaggcgggcgagccgtcc
cgaaaccccaaaatagtggttcccattcccgtgcacgtgagtcgcttcgccatccggagc
cagcatcagcagctggagcaagccagaccctga
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